KEGG   Rattus norvegicus (rat): 288079
Entry
288079            CDS       T01003                                 
Symbol
Polq
Name
(RefSeq) DNA polymerase theta
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    288079 (Polq)
Enzymes [BR:rno01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     288079 (Polq)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    288079 (Polq)
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII DUF4332 HHH_5 Helicase_dom4_arc HAGH_C
Other DBs
NCBI-GeneID: 288079
NCBI-ProteinID: NP_001099348
RGD: 1309795
Ensembl: ENSRNOG00000002471
UniProt: D4A628 A6IR96
Position
11:complement(77179190..77281270)
AA seq 2547 aa
MSLPRRSGKRRRSSSGSDSFSFSGDGDSCVSPQLLCRPVLSPPPGLGRGRRLAGTGTCKQ
RVSDDQIDQLLLANWGLPKAVLEKYHNFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSA
GKTLVAELLILKRVLETRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPTG
RFSSLDVAVCTIERANGLINRLIEENKMDLLGTVVVDELHMLGDSHRGYLLELLLTKVCF
VTRKSASCQADSASALACAVQIVGMSATLPNLQLVASWLNAELYHTDFRPVPLLESIKVG
NSIYDSSMKLVREFQPLLQVKGDEDHIVSLCYETVRDNHSVLVFCPSKKWCEKVADIIAR
EFYNLHHQPEGLVKSSEFPPVILDQKSLLEVIDQLKRSPSGLDSVLKNTVPWGVAFHHAG
LTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPVFGGQPLDILTYKQMVG
RAGRKGVDTMGESILVCKNSEKSKGIALLQGSLEPVHSCLQSQGEVTSTMIRAILEIIVS
GVASTSQDMQTYAACTFLAADVKEGKQGIQRNRDDVQRGAVDACVTWLLENEFIQAAEPS
DGTGGKVYHPTHLGSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTPVFEDW
TSIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFT
SLVLLDLISEIPLKEINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQF
QKRLTFGIQRELCDLIRVSSLNAQRARFLYASGFLTVADLARADTVEVEAALKDALPFKS
ARKAVDEEEEAAEERRSMRTIWVAGKSLSAREAAALIVEEAKVILQQDLIEMGVQWGPHS
PLSSSTHSLTSGSEVKEHTFKSQTKSSHKRLASKSRNSMRVSGSNGKQSPEAGQGLDECR
ERPDSLCKFQGNHEIQTPSVYRARKRTSLGVNKEMLRTSLKEGKPSTKEVLQTLSFEKTR
KAALSFSSEQANNSFPSGRDRKYRKKSWGSSPMSDSVMHRDDLQGQTMCKSTLCEDPQKS
LEEQNTEYRSPGLFAKNVSFCAKEKCNKTSFPLQMQQPCLRRKPESGAAVDHSVAVSQNK
NVVEQPPGAPRDRRGLAAHGRAEVNEVLTENGTESQLHDTHPVSQCLENHSEKQTNTCTR
QKTLTEGQAGISHVTRGSNDLTPIRCERLKLNSKEHDSNPCPQALGTNAGRTEAPQSSEA
LGQAGGQCENLLNSPGIQEKTSAHATNKTEHSHVANQAFCDFGDSLYLDTQSEEIIEQMA
TKNATQGAEAAGITEEGSATQNEPHSTTGGQHIPGAANTDHVDRKNTESVKENPEKNIDR
RTPHSLIFHSPTPQGGNSACFKENEHSVTDSQLNSFLQGLETQDKPIIPLAPQMRTSTGV
EEESLPETSLNMSDSILFDSFGEDSFGQRQSLDVKAKQPLLSEMTPNHFHNPPYPQEDPV
MTPHMSEPQGTLERMACLSGESIIFSEIDSAQVIEALDNMAAFYMQENCNPITLKTEPRD
LAALGNECPQGEVVRGEQHEGSSKPKFMEINQDNSFTWSAASFNLSPELQRILDKVSTPR
ENEEPELMHADLSCFEENSTESHERQDMNSDLGTVQRTSFLPSNGVKSRTEGLESKAKHG
GASSALPHKAAADDNGLIPPTPLPASASASASKLALPEILGTSVKHQKASCLFDSPSDNQ
NQDLSQELRDSLKDSDGSVVDTSFFLQSQDGLLLTQASCSSESLAIIDVASDQILFQTFV
KEWQCQKRFSISLACEKMTSSTSSKTATIGGRLKQVNSPQEASVEDDGFPVHGSDCAVVV
GLAVCWGGKDAYYLSLQKEQKQSEMSPSLAPPPLDATLTVKERMEYLQSCLQKKSDQERS
VVTYDFIQTYKVLLLSCGISLEPSYEDPKVACWLLDPDSKEPTLHSIVTSFLPHELALLE
GIETGPGIQSLGLNVNTDHSGRYRASVESVLIFNSMNQLNSMLQKENLHDIFCKVEMPSQ
YCLALLELNGIGFSTAECETQKHIMQAKLDAIETQAYQLAGHSFSFTSADDIAQVLFLEL
KLPPNGEMKTQGGRKTLGSTRRGTESDRKLRLGRRFSTSKDILNKLKDLHPLPGLILEWR
RISNAITKVVFPLQREKHLNPFLRMERIYPVSQSHTATGRITFTEPNIQNVPRDFEIKMP
TLVRESPPSQASGKGQLAMARQNQKVYGLHPGQRTVLEKTSDRGVPFSVSMRHAFVPFPG
GLILAADYSQLELRILAHLSRDCRLIQVLNSGADVFRSIAAEWKMIEPDAVGDNLRQQAK
QICYGIIYGMGAKSLGEQMGIKENDAACYIDSFKSRYKGINHFMRDTVKNCRRDGFVETI
LGRRRYLPGIKDNNPYHKAHAERQAINTTVQGSAADIVKVATVNIQKQLETFHPTFKSHG
HRESMLQSDRAGLLPKRKVKGMFCPMRGGFFILQLHDELLYEVAEEDVVQVAQIVKNEME
CAIKLSVKLKVKVKIGASWGELKDFDV
NT seq 7644 nt   +upstreamnt  +downstreamnt
atgagtcttccgcgccggagtgggaaacggcggcgttcatcatccggctccgactcattc
tcgttctcgggagacggtgatagctgtgtcagccctcagctcctgtgtaggccggtgctg
agtccacctccggggctgggacgcggccggaggctcgcagggacaggaacatgcaagcaa
agagtttctgatgaccagatagaccagctgctattggcaaactggggactccctaaagca
gttctggagaaataccacaattttggtgtaaaaaagatgttcgaatggcaggcagagtgt
cttttgctcggacaagtcctggaaggaaagaatctggtttattcagctcctacaagtgct
gggaagacgcttgttgcagagttacttattttgaagcgggttttggaaacgcggaagaaa
gcgttgttcattctgccctttgtgtctgtggctaaagagaagaaatactatctccagagt
ctgtttcaggaagtaggaataaaggtagatggctatatgggcagcacctcaccaactgga
cgtttctcctccttggacgttgctgtttgcactattgagagagccaatgggctgatcaat
cgcctcattgaggaaaataagatggatctcttaggaacggtggtcgtggatgagctacac
atgctgggggactctcaccgagggtatctgctggaactcttactgaccaaggtttgcttt
gtcactcggaagtcagcatcgtgccaggcagattcggccagtgctctggcttgtgctgtg
cagattgttggcatgagtgctactcttcctaacctgcagctcgtggcttcctggctgaat
gctgaactttaccatactgactttcgccctgttccacttttggaatcaataaaagtagga
aattccatatatgactcttcaatgaagcttgtgagagaatttcaacccctgctccaagtg
aagggagatgaagaccacattgttagtttatgctatgagacggttcgggataaccattca
gtattagtcttttgtccatcaaaaaaatggtgtgagaaggtggccgatatcattgcccgg
gagttttataatctgcaccatcaacccgagggattagtaaagtcatctgaatttccacca
gtgattctagaccaaaagagccttcttgaagtgatagatcagttaaaacgctcaccttca
ggactagactcggtgctgaagaatactgtgccatggggagtagcgtttcatcatgcaggt
cttacttttgaagagagggatatcatcgaaggagccttccgtcaaggtcttattcgcgtt
ttggcagcaacgtctactctttcttctggagtgaaccttcctgcacgtcgggtgattatt
cgcactccggttttcggtggtcagcctttagatatcctcacttataagcagatggttggt
cgtgctggcaggaaaggagtagacacaatgggtgaaagtatactagtttgtaagaactct
gagaaatccaagggcattgctctgcttcaaggttcgctggagcctgtgcacagctgtctg
caaagccagggagaagtcacttctaccatgatacgagctattctggagataatcgtcagt
ggggtggcaagtacgtcacaagatatgcagacttatgctgcctgcacattcttggctgct
gacgtaaaggaagggaagcaagggattcagaggaaccgagatgatgttcagcgtggggca
gtcgatgcctgtgtgacgtggctgttagaaaacgagttcatccaggcggcagagcccagt
gacggcacaggaggaaaggtgtatcacccaacacaccttggatcagctactctttcttcc
tcactttctccaactgataccctggatatttttgctgacctccaaagagcaatgaaaggc
tttgttttagagaatgaccttcatatcgtctacctggttacacctgtgtttgaagattgg
actagtattgattggtatcggtttttctgtttatgggaaaaattaccaacttctatgaaa
agggtggcagagctggttggagtggaggaagggttcttggctcgatgtgtgaaaggaaaa
gtagtagccagaactgagagacagcatcgacaaatggccatccataaaaggtttttcaca
agccttgtgttattggatttaatcagtgaaattcccttaaaggaaattaaccagaaatat
ggatgtaatcgtgggcagattcagtctttgcaacagtcagctgctgtctatgcaggaatg
attacggtgttttccaaccgtctgggctggcacaacatggagctactgctttctcagttt
cagaagcgtcttacgtttggcatccagagagagctgtgtgacctgatccgggtatcctcg
ctcaacgctcagagagccaggttcctgtatgcctctggctttctcaccgtggcggacctc
gccagagctgacactgtagaggtggaggcggctctgaaggacgctctgcctttcaaaagt
gcccggaaggcagtggacgaagaagaggaagcagctgaagaacgccggagtatgcgcact
atttgggtggctggcaagagcttatctgcaagggaagcagcagctttaatagtagaagaa
gccaaagtgattctgcagcaggacttaattgaaatgggagtacagtggggtccacactca
cccttgagttctagcacacactcactgaccagtgggtcagaagtaaaggagcacacgttc
aagtcccagactaagagttctcataaaaggttagcatcaaagagcaggaacagcatgaga
gtgagtggttctaatggtaagcagtcaccagaggcagggcaaggcctagacgagtgcaga
gagcgcccagactctctctgtaagttccaggggaatcacgagatccagacaccctccgtt
tatagggcaagaaaacggacttctttaggtgtaaacaaagaaatgcttcgaacctctctg
aaggaaggaaaaccaagcactaaggaagttcttcaaactctctcatttgagaaaacaaga
aaagctgctttgagttttagttcagagcaggcgaacaacagttttccatctgggagagac
agaaagtatcggaaaaaatcttggggtagcagtcccatgagtgactctgtgatgcataga
gatgatttacaaggacagactatgtgtaaatctactctatgtgaagacccacagaagtcc
ttagaggagcagaatacagaatacagaagtccagggctatttgcaaaaaatgtatctttt
tgtgccaaagaaaaatgcaacaaaacctcattccccttacaaatgcagcagccttgctta
aggagaaaaccagaaagtggtgctgccgtggaccattccgttgcggtgtctcagaataaa
aatgtggtggagcaaccccctggtgctcctagggacagaagaggattggctgctcatggc
agagcagaggtaaatgaggtgctcacagagaatggtacagaaagccaactccacgacact
catcctgtcagccagtgcctggaaaaccacagtgagaagcagacaaacacgtgcaccaga
cagaagacattgacagaggggcaagctggtattagtcatgtgactagaggctcaaatgat
ctcacacccatcagatgtgaacgtttaaagcttaacagcaaagaacatgactcaaatcct
tgtcctcaagcattgggaactaacgcaggcagaactgaggcacctcagtcatctgaagca
cttggtcaagcaggaggccagtgtgaaaatcttctaaattctcctggtatacaagaaaaa
acaagtgctcatgcaacaaataaaactgaacatagtcatgttgctaaccaagccttctgt
gactttggagatagcttatacttagacactcagtcagaggaaataattgaacagatggca
actaaaaatgccacgcaaggagcagaagcagcagggataacggaggagggctccgccact
cagaacgagcctcacagcactacaggtggccagcatatcccaggagcagccaacacagac
catgtggaccgtaagaacacagagtctgtgaaagaaaaccccgaaaagaacatcgacaga
agaactccacacagcctcattttccattctccaacacctcaggggggaaacagtgcttgc
tttaaagagaatgagcattctgttactgattcccagttaaacagttttcttcaagggttg
gaaacacaggacaagccaatcatacctctggctcctcaaatgagaacttctactggtgta
gaggaagaaagtctgcctgaaaccagtttgaatatgagtgacagtatactatttgacagt
tttggagaagatagctttggacaaagacagtcacttgatgtaaaggcaaaacagcccctc
ctttccgaaatgacaccaaaccatttccacaatcctccatacccacaagaagacccagtt
atgacaccacatatgagcgagcctcagggtactctggagcgaatggcttgtctcagtggt
gaatctattatattttcagagatagactctgctcaggtgatcgaagccttagacaatatg
gctgcattttacatgcaagaaaactgtaacccaataactcttaaaacagaacccagagat
ttggcagcgctgggtaatgagtgtccccaaggagaagtggtcagaggagaacaacatgaa
gggtcctcaaagcccaaattcatggagataaatcaagataattcattcacttggtcagca
gcatcatttaacttaagtccagagctgcaaaggattttagataaagtgtctactcctcga
gaaaatgaagagcccgaattgatgcatgcagacttgtcttgctttgaagaaaacagcaca
gagtcacatgagagacaggacatgaattcagacttggggacagttcagagaacttcattt
ctccccagtaatggagttaaaagcaggactgaagggctagagagcaaagccaagcatggt
ggagcctcatctgccttgcctcataaagctgcagctgatgacaacggcctcattcctcct
acaccccttcctgcctctgcctctgcctctgcctctaagctagcacttccagagattctc
ggaacatctgtaaaacatcagaaagccagttgtttatttgactcaccttcagataatcaa
aaccaggatttaagtcaagagcttagagacagcctcaaggactctgatggttctgttgta
gacacaagtttttttctgcagtctcaggatggactgctgttaactcaagcctcatgcagc
tcagagagcctggccataattgacgtagcgagtgaccagattctctttcagacatttgtg
aaggagtggcagtgccaaaagcgcttttccatctctctagcttgtgaaaagatgacaagt
tcgacgtcttccaaaactgctaccataggtggaaggttgaagcaagttaactcaccacag
gaagcctctgttgaagatgatgggttccctgtgcatggctctgactgtgctgtggtagtt
ggactagcagtgtgctggggtggaaaggatgcctattatttgtcattgcagaaggaacaa
aagcagtctgaaatgagtcctagtttggccccaccacctctggatgcaacactaactgtt
aaggagaggatggagtaccttcagtcctgcttgcaaaagaagtctgaccaagaacggtct
gttgtcacctatgatttcatccagacctataaagttctcctcttgtcctgtggcatctca
ctggaacccagctatgaagaccccaaggtggcttgctggcttcttgacccggattctaag
gagccaactcttcatagcatagtgaccagttttctcccccatgagctagcactcctagaa
ggaatagagacaggcccaggaattcagagcctggggctaaatgtgaacacagaccattct
gggcggtacagagcgagtgtggagtctgttctcatcttcaactccatgaatcaactcaac
tctatgttgcagaaggaaaaccttcacgatattttctgcaaagtggagatgccctctcag
tactgcctggccttgctggaactaaatggaattggctttagtactgctgagtgtgaaact
cagaagcatatcatgcaagccaagctggacgccattgagactcaagcctatcaactcgct
ggccacagcttctcctttacaagtgcagatgacatcgcacaggttttatttttggaacta
aagctaccaccgaatggagagatgaaaacacaaggcggcagaaagactctgggttccacc
agaagagggacggagagcgaccgcaaactcaggctgggaagacggttcagcactagtaag
gatattttaaataagttaaaggacttgcatcctttaccaggcctgatactggaatggaga
agaatcagtaatgctattaccaaagtggtcttccccttgcagcgggaaaagcacctgaac
ccctttctcagaatggagaggatctatcctgtatcacagtcacacacggctacaggacgg
ataacctttacagaacccaatatccaaaatgtgccaagagattttgagattaaaatgcca
acactagtaagagagagcccaccttctcaagcttcaggcaagggccagctcgcgatggcc
agacaaaatcagaaggtttatggcctgcacccggggcaaagaacggtgctggagaagacc
tcagatagaggcgtgccattttcagtgagcatgcgccatgcctttgtgcctttcccaggt
ggtttgatattggctgccgactactctcagctcgaactgaggatcctggcacacttatct
cgtgactgtcgtctcattcaagttttaaactcaggagcggatgtgttcaggagcattgcc
gctgagtggaagatgattgagcccgatgctgttggtgacaatctgaggcaacaggcaaag
cagatttgctatggaattatatatgggatgggagctaaatcgttaggagagcagatgggc
attaaagaaaatgatgctgcttgctatatcgactctttcaagtccaggtataaagggatt
aatcatttcatgagggacacagtgaagaactgtagaagagatggatttgttgagacaatt
ttgggaagacgtagatatttgccaggaatcaaagacaataatccttatcataaggcacac
gctgagcgtcaggccatcaacacaacagttcaaggctcagctgctgacatagtcaaagta
gccacagttaacatccagaagcagctagagaccttccatccaaccttcaaatcccatggt
catcgggaaagcatgctccagagtgaccgagcaggattgttgccaaagagaaaagttaaa
gggatgttttgtcctatgagaggaggattcttcatccttcaacttcacgacgagctttta
tatgaagtggcagaagaggatgttgttcaggtagctcagattgtcaagaatgaaatggaa
tgtgctattaaactttctgtgaagctgaaagtgaaagtgaaaataggtgccagctggggg
gagctgaaggactttgatgtgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (2)   
   RefSeq(pep) (7)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (10)   
   Pfam (10)   
All databases (38)   

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