KEGG   Rattus norvegicus (rat): 288371
Entry
288371            CDS       T01003                                 
Symbol
Mcoln1
Name
(RefSeq) mucolipin-1
  KO
K04992  mucolipin 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04020  Calcium signaling pathway
rno04142  Lysosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    288371 (Mcoln1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    288371 (Mcoln1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    288371 (Mcoln1)
Ion channels [BR:rno04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   288371 (Mcoln1)
SSDB
Motif
Pfam: MCLN_ECD PKD_channel Ion_trans
Other DBs
NCBI-GeneID: 288371
NCBI-ProteinID: NP_001099373
RGD: 1308953
Ensembl: ENSRNOG00000000975
UniProt: A6KQ06
Position
12:6357851..6372151
AA seq 580 aa
MATAAGRRGSETEQLLTPNPGYGTQAGTSPAPTTPPEEEDLRRRLKYFFMSPCDKFRAKG
RKPCKLMLQVVKILVVTVQLILFGLSNQLVVTFREENTIAFRHLFLLGYSDGSDDTFAAY
TREQLYQAIFYAVDQYLTLPEISLGRYAYVRGGGGPWANGSALALCQRYYHRGHVDPAND
TFDIDPRVVTDCIQVDPPDRPPDIPSEDLDFLDGSTSYKNITLKFHKLINVTIHFQLKTI
NLQSLINNEIPDCYTFSILITFDNKAHSGRIPIRLETQTHIQECKHPSVSRHGDNSFRLL
FDVVVILTCSLSFLLCARSLLRGFLLQNEFVVFMWRRRGREISLWERLEFVNGWYILLVT
SDVLTISGTIMKIGIEAKNLASYDVCSILLGTSTLLVWVGVIRYLTFFHKYNILIATLRV
ALPSVMRFCCCVAVIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLINGDDMFVTFAAM
QAQQGRSSLVWLFSQLYLYSFISLFIYMVLSLFIALITGAYDTIKHPGGTGTEKSELQAY
IEQCQDSPTSGKFRRGSGSTCSLLCCCGRNSPEDHSLLVN
NT seq 1743 nt   +upstreamnt  +downstreamnt
atggccaccgcggcgggccggcgcggctcagagaccgagcaattgctgacccccaatcct
gggtatgggacccaggcggggacctcaccagcccccacaacccccccagaagaggaagac
ctccgccgccgcctcaagtacttttttatgagtccatgtgacaagttccgggccaaaggt
cgcaagccctgcaagttgatgctgcaggtggtcaagatcttggtggtcactgtgcagctc
attctctttggactcagcaaccagctggtggtgacattccgggaagagaacaccattgcc
ttccgacacctcttcctgctgggttactctgatgggtctgatgacacctttgcggcctac
acacgggagcagctctaccaagccatcttctatgctgtggaccagtacctgacactaccc
gagatatccctgggccggtatgcctatgtccgtggtgggggcgggccttgggccaatggc
tcagctctggctctctgccagcgatattaccaccgtggccatgtggacccagccaacgat
acctttgacattgatccaagggtagtcactgactgtatccaggtggatcctcctgacaga
cctcctgacatccccagtgaggacttggacttcttggatggcagcaccagttacaagaac
atcacattgaaattccacaagctgatcaacgtcaccatccacttccaactgaagacaatt
aacctgcagagcctcatcaacaacgagatccctgactgttacaccttcagtatcctgatc
acatttgacaataaagcacacagtgggcgaatccccatccgcctggagacccagacccac
atccaggagtgtaaacaccccagtgtctccagacacggagacaacagcttccggcttctg
tttgatgtggtggtcatcctcacctgctccctgtccttcctgctgtgtgcccgctcactg
ctccgtggcttcctgctgcagaacgagtttgttgtattcatgtggcggcggcggggccgg
gaaatcagcctctgggaacggctggagtttgtcaatggctggtacatcctgctggtcacc
agtgacgtgcttaccatctcggggactatcatgaagattggcattgaggcaaagaaccta
gccagctatgatgtctgcagcatcctcctgggtacctccactctgctggtctgggttggt
gtcattcgctacctgacatttttccacaagtacaatatcctgattgccacgttgcgagtg
gcactgcccagtgtcatgcgtttctgctgctgtgtggctgtcatctacctgggctattgc
ttctgcggctggattgtcctgggaccctaccatgtgaagttccgctcgctgtccatggtt
tccgagtgcctgttctccctcatcaacggggacgacatgttcgtgacgtttgcagccatg
caggcccagcagggtcgcagtagcctggtgtggctcttctcgcagctctacctctactcc
ttcatcagcctcttcatctacatggtgctgagtctcttcatcgcactcatcaccggcgcc
tacgacactatcaagcacccaggaggcactggcacagagaagagtgagctccaggcctac
attgagcagtgccaggatagccccacgtctggcaagttccgtcgtggaagtggctccact
tgtagccttctgtgctgctgtggaaggaactctccggaggaccattcactgctggtgaac
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (13)   
   RefSeq(nuc) (11)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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