KEGG   Rattus norvegicus (rat): 288449
Entry
288449            CDS       T01003                                 
Symbol
Katnal1
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 1
  KO
K07767  katanin p60 ATPase-containing subunit A1 [EC:5.6.1.1]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    288449 (Katnal1)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.1  microtubule-severing ATPase
     288449 (Katnal1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     288449 (Katnal1)
SSDB
Motif
Pfam: AAA KATNA1_MIT AAA_lid_3 Vps4_C RuvB_N AAA_16 TIP49 AAA_5 AAA_33 AAA_14 Mg_chelatase IstB_IS21 AAA_22 AAA_18 AAA_28 AAA_7 AAA_17 TsaE AAA_2 nSTAND3 RNA_helicase NACHT Parvo_NS1 PhoH CCDC22_CC AAA_25 AAA_30 AAA_24 SRPRB bpMoxR Guanylate_kin
Other DBs
NCBI-GeneID: 288449
NCBI-ProteinID: NP_001006957
RGD: 1359252
Ensembl: ENSRNOG00000047618
UniProt: Q5XIK7 A6K183
Position
12:11130935..11192330
AA seq 488 aa
MNLAEICENAKKGREYALLGNYDSSMVYYQGVIQQIQRHCQSLRDPATKAKWQQVRQELL
EEYEQVKSIVSTLESFKMDKPPDFPVSCRDEPFRDPAVWPPPVPAEHRAPPQIRRPNREV
RPLRKDMGAGARGLVGRAHQISKSDKAASRDKDYRARGRDDKARKNMQDGASDGEIPKFD
GAGYDKDLVEALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWK
GVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPT
TIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPW
DIDEALRRRLEKRIYIPLPTAKGRAELLKISLREVELDPDIHLEDIAEKTEGYSGADITN
ICRDASLMAMRRRINGLSPEEIRALSKEELQMPVTRGDLELALKKIAKSVSAADLEKYEK
WMVEFGSA
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgaatttggccgagatttgtgagaatgcgaagaaaggccgggaatatgcacttctgggg
aattatgactcgtcaatggtgtattaccagggagtaatacagcagatccagagacactgc
cagtcactgagagacccggccaccaaagcgaagtggcagcaggttcggcaggagctcttg
gaagaatatgaacaagttaagagtatcgtcagcacgttagaaagctttaagatggacaag
ccccctgacttccctgtgtcttgtcgagacgaaccgtttagagatccggcagtatggcca
cccccggtccctgcagaacacagagcaccacctcaaatcaggcgtcccaaccgagaagtg
aggcctctgcggaaagacatgggggcaggagcccggggcctcgtgggccgagcacaccag
atatcgaagagtgataaagctgcaagtcgggacaaggactatagagcaagagggagagat
gacaaggcaaggaaaaatatgcaagatggcgcaagtgatggtgagatccccaagttcgat
ggcgctgggtatgacaaggatctggtggaggctctggagagggacattgtgtccaggaac
cctagcattcactgggatgatatagcagatctggaggaagctaagaagttgctccgggaa
gctgttgtccttcccatgtggatgcctgactttttcaaagggattagaaggccatggaag
ggtgtgctgatggtcggccctccagggactggtaagactatgctggctaaagctgttgcc
accgaatgtgggacaacctttttcaacgtctcctcttccaccctgacgtctaagtaccga
ggcgagtctgagaagttggtccgtctgttgtttgaaatggcgaggttctatgcccctacc
acgatcttcatcgacgaaatagactccatctgcagtcgaagagggacctccgatgagcat
gaggccagccgcagagtgaagtccgagctcctcatccagatggacggagttggaggagcc
ttagaaaacgatgatccatccaaaatggtgatggtcctggcggctacgaacttcccgtgg
gacatcgatgaggctctgcgcaggagactggagaagaggatctacatccctctccccaca
gcaaaaggaagggcggagctcctgaagatcagcctccgggaggtggagctggaccccgac
atccacctggaggacatcgctgagaagacggagggctactcgggcgctgacataactaac
atctgcagagatgcttctctgatggccatgaggcggcgcatcaacggcctgagtccagaa
gagatcagggccctgtccaaggaggagctgcagatgcctgtcaccagaggggacttggag
ctggcgctgaagaaaatcgccaagtctgtctctgcggcagacctggagaagtacgaaaag
tggatggttgagttcggatctgcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (31)   
   Pfam (31)   
All databases (59)   

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