KEGG   Rattus norvegicus (rat): 288516
Entry
288516            CDS       T01003                                 
Symbol
Eif3b
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
  KO
K03253  translation initiation factor 3 subunit B
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    288516 (Eif3b)
   03012 Translation factors [BR:rno03012]
    288516 (Eif3b)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     288516 (Eif3b)
Translation factors [BR:rno03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    288516 (Eif3b)
SSDB
Motif
Pfam: eIF2A RRM_1 Nup35_RRM Methyltr_RsmF_N PALB2_WD40
Other DBs
NCBI-GeneID: 288516
NCBI-ProteinID: NP_001026810
RGD: 1309018
Ensembl: ENSRNOG00000001253
UniProt: Q4G061 A6K1S6
Position
12:complement(19310308..19334768)
AA seq 797 aa
MQDAENVAAPEAAEERAEPARQQPVSESPPTDEAAGSGGSEVGRTEDAEEDAEARPEPEV
RAKPAAQSEEETAASPAASPTPQSAQEPSAPGKAEAGGEQARHPSARAEEEGGSDGSAAE
AEPRALENGEADEPSFSDPEDFVDDVSEEELLGDVLKDRPQEADGIDSVIVVDNVPQVGP
DRLEKLKNVIHKIFSKFGKIINDYYPEEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDK
QHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFESGDRTS
IFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALWGGDKFKQIQRFSHQGVQ
LIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF
FARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQ
LPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGVVTNFEIFRMREKQVPVD
VVEMKETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKSNGKIELIKMFDKQQANTIFWS
PQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVTSVSWWSHKV
DNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQDQIKQIKKDLKKYSKIFEQKDRL
SQSKASKELVERRRTMMEDFRQYRKMAQELYMKQKNERLELRGGVDTDELDSNVDDWEEE
TIEFFVTEEVIPLGSQE
NT seq 2394 nt   +upstreamnt  +downstreamnt
atgcaggacgctgagaacgtggcggcgcccgaggcggccgaggagcgggccgagcccgcg
aggcagcagccggtctccgagtcaccgccgacggacgaggcggcagggtctggcgggtcc
gaagtggggcggacggaagacgccgaggaagacgccgaggccagaccggagcccgaggtg
agggccaagccggcggcccaatccgaagaggaaacggcggcgagtccggccgcctcgccc
acgccgcagtcggcgcaggagccctctgctcccgggaaggcggaggccggcggagagcag
gccaggcacccctcggctagagcggaggaggagggcgggtccgatgggagcgcggccgag
gcggagccgcgggctctggagaacggagaggcagatgagccctccttcagcgaccccgag
gatttcgtagacgacgtgagcgaggaagaactacttggtgatgtactcaaagatcggcct
caggaagcggatgggattgactcggtgattgttgtagacaacgttcctcaggtgggaccc
gaccggcttgagaagctcaaaaatgtcatccacaagatcttctccaagtttgggaaaatc
ataaatgactattaccctgaagaggatggaaagacgaaagggtacatctttctggaatat
gcttctcccgcccatgctgtggatgctgtgaaaaatgcagatggatacaagctggacaag
cagcacacgttccgggtcaacctcttcactgattttgataagtacatgaccatcagtgac
gagtgggacatcccagagaagcagcctttcaaagacctgggcaatctgcgctattggctg
gaagaggcagagtgtagagatcagtacagtgtgatttttgagagcggagaccggacatcc
atcttctggaatgacgtcaaggacccagtctcaatcgaagaaagagcgagatggacagag
acatatgtgcgctggtcccctaagggcacctacctggccaccttccatcagcggggtatc
gccctctggggaggggacaagttcaagcagatccagaggttcagccaccaaggcgtgcag
ctcatcgatttctcaccttgtgaaagatacctggtgactttcagcccactgatggacact
caggatgaccctcaggccatcattatctgggacatcctcacagggcataagaagagaggt
tttcactgtgaaagctcagcccactggcccatcttcaagtggagccatgatggcaaattc
tttgcaagaatgaccctggatacccttagcatctatgaaacaccttccatgggccttttg
gacaagaagagcttgaagatctctggaataaaagacttttcttggtctccgggtggtaac
atcattgccttttgggtgccagaagacaaagatattccagccagggtgaccctgatgcag
ctccccaccagacaggagatccgagtgaggaatttgttcaatgtggttgattgcaagctg
cactggcagaaaaatggagattacctgtgtgtaaaagtggacaggactccaaaaggcaca
cagggagttgtcacaaattttgaaatcttccgaatgagggagaagcaggttcctgttgac
gttgttgagatgaaagagaccatcatagcctttgcctgggaacccaatggcagtaagttt
gctgtgcttcatggtgaggcccctcggatatctgtctccttctaccacgtgaagagcaat
gggaagattgaactcatcaagatgtttgacaagcagcaagccaataccatcttctggagt
ccccaggggcagttcgtggtactggccgggctgaggagcatgaatggcgccttggcgttt
gtcgacacttcagactgcaccgtcatgaacattgcagagcactacatggcctccgacgtc
gaatgggacccaactggccgctatgtggttacctctgtgtcgtggtggagccataaggtg
gacaatgcttattggctgtggaccttccaaggtcgtcttctccagaagaacaacaaggac
cgcttctgccagctgctctggagaccaaggcccccaacactcctcagtcaggatcagata
aagcaaattaaaaaggatctgaagaaatactctaagatctttgagcagaaggatcgcttg
agccagtccaaagcttcaaaggaactggtggaaagaaggcggaccatgatggaggacttc
aggcaataccgaaaaatggcccaggaactctatatgaagcagaagaacgagcgtctagag
ctacggggaggggtggacactgacgagctggacagcaacgtggatgactgggaggaagag
accattgagttttttgtcactgaagaggtcattcctctgggaagtcaggagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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