KEGG   Rattus norvegicus (rat): 288563
Entry
288563            CDS       T01003                                 
Symbol
Actl6b
Name
(RefSeq) actin-like protein 6B
  KO
K11652  actin-like protein 6B
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03082  ATP-dependent chromatin remodeling
rno04714  Thermogenesis
rno05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    288563 (Actl6b)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    288563 (Actl6b)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    288563 (Actl6b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    288563 (Actl6b)
   03036 Chromosome and associated proteins [BR:rno03036]
    288563 (Actl6b)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     288563 (Actl6b)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    288563 (Actl6b)
   PBAF complex
    288563 (Actl6b)
   GBAF(ncBAF) complex
    288563 (Actl6b)
SSDB
Motif
Pfam: Actin MreB_Mbl
Other DBs
NCBI-GeneID: 288563
NCBI-ProteinID: NP_001099387
RGD: 1307763
Ensembl: ENSRNOG00000001408
UniProt: P86173
Position
12:complement(24761660..24778193)
AA seq 426 aa
MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGEKEK
KGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMS
EAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVH
DGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKL
PQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLR
IPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDR
LNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQC
VERKCP
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgagcgggggcgtctacggcggagatgaggtgggggcgctcgtctttgacattggctcc
ttctcagtccgagctgggtacgctggggaggactgccccaaggctgacttccccaccact
gtggggctgctggccgcagaagaggggggcgggctggagctggagggggagaaagagaag
aaagggaagattttccacatcgacaccaatgccctgcacgtgcctcgggatggagcagag
gtcatgtcgcccctcaagaacggcatgattgaggactgggagtgcttccgagccatcctg
gatcatacctacagcaaacatgtcaagtccgaaccaaacctgcacccagtactcatgtcg
gaggctccgtggaacactcgggccaagcgggagaagctgacagagctgatgttcgagcag
tacaacattcctgccttcttcttatgcaagacggccgtgctcacagcctttgcaaatgga
cgctccacaggcctggtgctagacagcggggccacccacactacagccatcccagtccat
gatggctatgtcctacagcaaggcatcgtcaagtcacccctggctggcgacttcatatcc
atgcagtgccgggagctcttccaggaaatggctattgatatcatccctccttacatgatt
gctgccaaggagcctgtacgggagggagcccccccaaactggaagaagaaggagaagcta
ccccaagtctccaagtcctggcataactacatgtgtaacgaggtgatccaagacttccag
gcctctgtactgcaggtgtctgattccccttacgatgaacaggtagctgcacaaatgccc
acagtgcattatgaaatgcccaatggctacaacacagactatggtgctgagagacttcgc
atccctgagggcctgtttgatccctctaatgtcaagggtctgtctgggaacaccatgcta
ggagtgggtcacgtggtcaccaccagcatcggcatgtgtgacatcgacattcgcccgggt
ctctatggcagtgtcattgtcactggcggcaacactctgcttcaggggttcacagacaga
cttaatcgggagctttcccagaagaccccaccgagcatgcggctcaagcttatcgccagc
aacagcaccatggaacgcaagttcagcccctggattgggggctccatcttggcctcactg
ggcacgttccagcagatgtggatctccaagcaggaatatgaggagggagggaagcagtgt
gtggagcggaagtgcccctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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