KEGG   Rattus norvegicus (rat): 288595
Entry
288595            CDS       T01003                                 
Symbol
Nsun5
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase
  KO
K15264  25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    288595 (Nsun5)
Enzymes [BR:rno01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.311  25S rRNA (cytosine2278-C5)-methyltransferase
     288595 (Nsun5)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   288595 (Nsun5)
SSDB
Motif
Pfam: NSUN5_fdxn-like NSUN5_N Methyltr_RsmB-F FtsJ Methyltransf_31
Other DBs
NCBI-GeneID: 288595
NCBI-ProteinID: NP_001178522
RGD: 1309268
Ensembl: ENSRNOG00000001450
UniProt: A6J0D2 G3V660
Position
12:complement(26930204..26935887)
AA seq 451 aa
MGLYATAAAVLAGVESRQGSLKGLVYSSNFQNLKQLYALVCETQRYSAVLDAVIASAGLL
RAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNED
LLQERPGQAHQVPRFVRVNTLKTCPEDAIDYFKRQGFSYQGRASSLEDLRTLKGQHFLLD
PLLPELLVFPAQTDLHEHPLYRAGHLILQDKASCLPAMLLSPPPGSHVIDACAAPGNKTS
YIAALLKNQGKIFAFDQDAKRLAAMATLLARAGVSCCEVAEKDFLTVSPSDQRYGQVQYI
LLDPSCSGSGMLSRQLEEHGEGTPSKERLQALAGFQQRALCHALRFPSLQRLVYSTCSLC
QEENEDVVQEALQQNSGTFRLAPVLPTWPHRGLSTFPGSEHCLRASPETTLTGGFFIAVF
ERAEVVPSPAPQTSAVVPEPLSKAPKRKRRR
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggggctgtacgcgactgccgctgcggtcctggccggcgtggaaagccgccagggctcc
ctcaaggggttagtgtattccagcaacttccagaatctgaagcagttgtacgcgctggtg
tgcgagacgcagcgctactcggccgtgctggacgccgtgatcgccagcgccgggctcctt
cgtgctgagaagaagctgcggccgcatcttgccaaggtgctagtgtatgaattgttgctg
gggaaggggtttcgagggggtggaggccgatggaaggctctgctgggccggcaccaggca
aggctcaaggccgagttggcccgactcaaggttcatcggggtgtgagccgaaacgaggac
ctgttgcaagagagacccggccaagcccaccaggtaccacggttcgtgcgtgtgaacacg
cttaagacctgccctgaggacgcgatcgattatttcaagagacaaggtttctcctatcag
ggtcgggcgtccagcctggaggacttacgaactctcaaggggcaacattttcttttggat
cccttgctgcccgagcttcttgtatttcctgcacagacagatctgcatgagcatccactc
taccgtgctggccacctcatcctgcaggataaggccagctgcctcccagccatgctgctg
tctcctccaccaggctcccatgtcattgatgcctgtgctgcccctggcaacaagaccagc
tacattgcagcccttctgaagaaccaggggaagatcttcgctttcgaccaggatgctaag
cggctggcagccatggcgacactgttggctcgggctggggtctcttgctgtgaggtagca
gagaaggacttcctgacagtttctccctctgaccagcgttatggccaggtccagtacatc
ttgctggatccttcttgtagtggctctggcatgctgagccggcagctggaggaacacggg
gaaggcacacctagcaaggagcgcttgcaggccttggcagggttccagcagcgggctctg
tgccatgcactcaggttcccctctctgcagcgcctcgtctattccacttgttccctttgc
caagaggagaatgaagatgtggtccaggaggctctacagcagaactctggaacgttcagg
ctggctcctgtcttacccacatggcctcaccgaggtctgagcacctttccagggtctgaa
cactgcctccgggcttcccctgagaccacactcactggcggcttcttcattgctgtgttt
gaacgtgcagaggtggtgccgagcccagccccacagaccagtgcagtggttccagaacct
ctcagcaaagcaccaaaaagaaagagaagacgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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