KEGG   Rattus norvegicus (rat): 288602
Entry
288602            CDS       T01003                                 
Symbol
Ervfrd-1
Name
(RefSeq) envelope glycoprotein syncytin-A precursor
  KO
K24396  syncytin-2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09185 Viral protein families
   03210 Viral fusion proteins [BR:rno03210]
    288602 (Ervfrd-1)
Viral fusion proteins [BR:rno03210]
 Class I fusion proteins
  Metazoa
   288602 (Ervfrd-1)
SSDB
Motif
Pfam: TLV_coat Imm61
Other DBs
NCBI-GeneID: 288602
NCBI-ProteinID: NP_001014771
RGD: 1563240
Ensembl: ENSRNOG00000050672
UniProt: Q5G5D4
Position
12:27787680..27794732
AA seq 618 aa
MVRPWVFCVLLFPCSSAHSDSWMPLVNLTQRLLRDANSSFSSNCWVCLSIQTQRSLAVPA
PLRSWTETPMKLRIMYSARTLSGSYPITDLERRLQNFQPLTPHYSFVNPDRRAIAFLQVT
SITGILPILSRLTPVKYPNDRFYESAQRPIWGSLSTQTILTAQAPLCISRFFKNSKYATF
VGNLSASLCNHTFQLSPSANHQSIDLSTSYAFAPLMAMPGLKWRNPLHFSGPPSLNSGKP
HHSCPVDDIHCHTYPTTPWRYCPSFLSSSTCYNLTLFEPNNVSHPITLSVDTTYFKIKLQ
GHKDPYPLFQYQPLMGAALSGQYSIWENEPNVQENGGLTPNIFSHLVSLTYSFCLNSSGV
FFLCGNSTYVCLPANWSGVCTLVFQYPDIELLPNNQSIMVPLFATVPSSVPASRRKRALH
LLPLAAGLGIASALGLGAAGIATSTMYFQKLSKALSNSLDEVATSILSLQDQIDSLAGVV
LQNRRALDLLVAEKGGTCLFLQEECCFYINQSGVVRYAARKLRERASELGPSSRSWIQQL
GLGPWLPSWLTSFMGPILFILVVLVLGPCLLNCLTHSVSRRMSSFIHTTTKGHVDKILLH
RETQYKRLPQEPQEEDSV
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggttcgtccttgggttttctgtgtcctcctgttcccttgttcctctgcccactcggac
agctggatgccccttgtaaacctcacccaacgcctcctccgggatgctaactcttccttt
tcttccaactgctgggtctgcctgtccatccaaacgcagcgctctctagccgtgccagcc
ccactcaggagttggacagagacacccatgaaactgcgtatcatgtactcggctcggacc
ctctcaggctcttaccccattaccgaccttgagagacgcctccagaatttccagccattg
acgcctcactactctttcgtcaatcctgaccggcgggccattgctttcctccaggtcacc
agtataacaggcatacttccgatactttcccggctcaccccggtgaaataccccaatgac
cgcttctacgaatctgcccagcgccccatatgggggtcactgtctacccagacgatcctc
accgcccaggcccctctctgcatatcccgtttcttcaagaattcaaaatatgccaccttc
gtgggtaatctctctgcctctctttgcaaccacacctttcagctttccccctctgccaac
caccagtccattgatctgtccaccagctatgcatttgccccactgatggccatgccaggc
cttaaatggagaaaccccttacacttttcaggacccccttccctaaactcagggaaacct
caccactcttgcccggtagatgacatccattgtcacacctaccccaccaccccctggagg
tactgcccttccttcctgtcgtctagcacctgctacaatctcaccttattcgaacccaac
aatgtgagtcaccctattaccctgtctgtagacaccacctacttcaagattaaactccag
ggacacaaagacccctatccactctttcagtaccagcccctcatgggggcagccctctcg
ggacaatattcaatctgggagaatgaacccaatgtccaagaaaatggcgggctcactcca
aatatcttctcccatcttgtctctttaacatactccttctgtctcaactcctccggcgtt
ttcttcctctgtggaaactcaacttatgtctgtctcccggccaattggtcgggcgtctgt
actcttgtctttcaatacccggatattgaactccttcctaacaaccaaagcataatggtt
cccctttttgctacagttccctcttctgtccccgcttctcgccggaagcgagcccttcat
ctccttcctcttgcagccggtctgggcattgcttcagccctcgggttaggcgcggctggg
atcgccacctcaaccatgtatttccaaaagctttccaaggctctctcgaacagcctagac
gaagtggccacatccatcctcagcctccaagaccaaatagactcactggcgggtgtcgtc
ctccaaaaccgcagagctctggacctccttgtggctgagaaagggggcacctgcctcttc
ctccaggaagaatgctgcttctacataaaccagtctggagtagtccggtatgcggcaagg
aaacttcgagaaagggcatcggaactcggcccaagctcgagatcgtggatccagcagctg
ggactgggaccctggctgccctcttggttgacttccttcatgggacccattctctttatc
ctggtagtgcttgttttggggccttgtcttctcaattgcctgacgcattctgtatcccgg
cgaatgagttctttcattcacaccaccaccaaagggcacgtggacaagatccttctgcat
cgagagacccagtacaagagacttccccaagaaccccaggaggaggattccgtctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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