KEGG   Rattus norvegicus (rat): 288734
Entry
288734            CDS       T01003                                 
Symbol
Chfr
Name
(RefSeq) E3 ubiquitin-protein ligase CHFR
  KO
K10644  E3 ubiquitin-protein ligase CHFR [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    288734 (Chfr)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     288734 (Chfr)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    288734 (Chfr)
SSDB
Motif
Pfam: zf-CRD FHA zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-C3HC4_3 Yop-YscD_cpl zf-CCHH zf-rbx1 zf-RING_6 Glyco_hydro_92
Other DBs
NCBI-GeneID: 288734
NCBI-ProteinID: NP_001009258
RGD: 1306360
Ensembl: ENSRNOG00000037430
UniProt: Q5PQJ8
Position
12:complement(52164214..52197860)
AA seq 663 aa
MEPHGEDEQPPPREPWGRLLRLGAEEDEPQILLWKREWTIGRRRGCDLSFPSNKLVSGDH
CKLRVDEKSGEVTLEDTSTNGTVINKLRVVKKQTYPLQSGDIIYLVYRKNEPEHNVAYLY
ESLNGKQSLTQESLEANKENMFHVTKESSGPGQGDDPQVPLLSPMAQTCLEEPQPSTSTS
DLLPTASTSSTEPELTSAGQKHSSSSGPGTISISPKECSSLVANGELSSLSSVFQDNEAS
FSLLKTEDTEELEPAKKKMKGDGELDLNLQLSVADQRGIAQTSSEDVKDASVKPDKMEET
LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEA
YLLQHPDKSRSEEDVRSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDI
SQPYIVCRQCPEYRRQAVQSLPCPVPESELGATQALGGEAPSTSASLTTAPGYTCPLQGS
HAICTCCFQPMPDRRAEHEQDSRIAPQQCAVCLQPFCHLYWGCTRTGCFGCLAPFCELNL
GDKCLDGVLNNNNYESDILKNYLTTRGLTWKNMLTESLLALQRGVFILSDYRITGNTVLC
YCCGLRSFRELTYQYRQNIPASELPVTVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTR
FKN
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggagccacacggggaagacgagcagccgccaccgcgggagccctgggggaggcttctt
cgcctaggcgcagaggaggacgaaccccagatccttctttggaaacgcgagtggaccatc
ggaaggaggagaggctgtgacctctcttttcccagcaataaactggtctctggagatcac
tgtaaacttagagtggatgaaaaatctggtgaggtgacactggaagacaccagcaccaat
ggaacagtaatcaacaaactgcgagttgttaagaagcagacttaccctttacagagtggg
gatatcatctatttggtgtacaggaagaacgagccagagcacaatgtggcatacctctat
gaatctttaaatggcaaacagagcttaactcaagaatcccttgaagccaataaagaaaat
atgttccatgtgaccaaagaatcctcaggtccagggcagggtgatgacccccaggttcca
ctcttgtcacccatggctcagacatgcttagaggaaccacagccatcaacatcgacatca
gacctccttcccacggcctctacctcttctacggagccagagctgacctctgcagggcaa
aagcattcctctagctctggacctgggactataagcatctccccaaaagaatgtagttca
cttgttgcaaatggtgaactctctagcctttcttcagttttccaagacaacgaagcatcc
ttttctttgttgaaaaccgaagacactgaggaattggagcctgccaaaaaaaagatgaaa
ggagatggggagcttgacttgaacctccagttatcagttgcagaccagcgtggaattgcc
caaacctcaagtgaggatgtcaaagatgcctctgtgaaaccagacaagatggaggagaca
ctaacctgtatcatctgtcaagaccttctgcatgactgtgtgagtttgcagccttgtatg
cacacattttgtgcggcttgctactctggttggatggagcgttcatctctgtgccctacc
tgccgatgtccagtggagcggatttgcaaaaaccacatcctgaacaaccttgtggaagca
taccttctccagcacccagataagagtcgcagtgaagaagatgtgagaagtatggatgca
aggaataaaatcactcaagatatgctgcaacccaaagtcaggaggtctttctctgatgaa
gaggggagttcagaggacctgctagagctgtctgatgttgatagtgaatcctcagacatc
agtcagccatacattgtatgcagacagtgtcctgaatacagaaggcaagcagtgcagtct
cttccttgcccagtcccagagagtgagctgggagccacacaggcccttggtggggaagca
ccttcaacatctgccagcttgacaacagccccgggttatacatgccctcttcagggaagc
catgccatatgcacctgctgcttccagcctatgccggaccggagagctgagcatgagcag
gattcccgcatcgcccctcaacagtgtgcagtgtgcctgcagcccttctgccacctgtac
tggggctgcacgcgaactggctgctttggctgcttggccccattctgtgagctcaacctg
ggggacaagtgtttggatggagtgctgaacaataacaattatgagtcggatatcctgaag
aattacctgacaaccaggggtctgacatggaaaaatatgttgacagagagtctcctggct
ctacagcggggtgtatttatactgtctgattacagaatcactggaaacaccgtgctgtgt
tactgctgtggtctgcgtagcttccgagagctgacctatcagtatcgtcagaacattcct
gcttcagagttgccagtgaccgtaacatcccgtcctgattgctactggggccgcaactgt
cgcactcaggtgaaggctcaccatgcaatgaaattcaatcacatctgtgagcaaacaagg
ttcaagaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (31)   

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