KEGG   Rattus norvegicus (rat): 289007
Entry
289007            CDS       T01003                                 
Symbol
Thsd7b
Name
(RefSeq) thrombospondin type-1 domain-containing protein 7B precursor
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: TSP1_spondin TSP1_ADAMTS TSP_1
Other DBs
NCBI-GeneID: 289007
NCBI-ProteinID: NP_001178598
RGD: 1306938
Ensembl: ENSRNOG00000003878
UniProt: F1LPD7
Position
13:43320895..44219546
AA seq 1607 aa
MFPRSDLAVTHWVSRSMRKVFLVLSLLLSQAAHLEGRKDNQFIWKTGPWGRCAGDCGPGG
TQSRAVWCFHIEGWTSPMANCDESSRPPKERSCFRVCDWHSDLFQWEVSDWHRCLLVPGA
QGEPRPRAVECVTAQHGLQHRTVRCLQKLNRTMVASEICEHFVPQPPTEQACLIPCPRDC
VVSEFSPWSTCPEGCGKKLQHRTRVAIAPPLYGGLQCPNLTESRACEAPISCPLGKEEYS
FSLKVGPWSKCRLPHLKEAELGGRNVQDFSSDSNEQVTLTHQSYKAQHHSQPGAIEIGFQ
TRQVWCTRSDGRNALLSLCMRDSFPLTVQPCVMPKDCETSEWSPWSPCSKTCRSGTLSPG
VRSRSRNVKHIAIGGGQECPELLEKETCIAEGEFLQPCPRYSWRTSEWKECQVSLLLEQQ
DPLWHKTGPICGGGIQTREVYCAQSFPATITSRTKEVSRPVESTLCLGPAPSASQLCNVP
CSTDCIVSSWSAWGPCVYENCHDPQGKKGFRMRQRHVLMESTGPVGHCPHLAESVPCEDP
MCYRWLASEGICIPDHGKCGLGHRILKAVCQNERGEEVSGGLCPVPPPPERMACEIPCRM
DCVVSEWTVWSSCSQSCSNKNSDGKQTRSRSIVALAGEGGKPCPGSQELQEYRLCNDHSC
AQLYWETSAWGSCSENTLVTALNMSIGWNGEATCGVGIQTRKVFCIKSHVGQVMTKRCPE
STRPETVRPCFLPCKKDCLVTAFSEWRPCPWPCQPGNTTIKQSRYRIIIQEAANGGQECP
DTLFEERECEDISLCPTYRWKPQKWSPCILVPESIRQGRTGTSEACGKGLQTRDVSCISD
DNQSAEMTECLRQMNGMPPLVQECTIACREDCTFTPWSKFTPCSKNCEATQIRRRQLTGK
SRKKERCQDASLYPLVELEPCPCDAFMSHPYGNWSACILPEGKRDPQQGGLWVQGDDKEC
GEGVRFRAIACTDINGRPVDPSFCNSSGYIQEACVIPCPFDCKLSDWSSWGSCSSSCGIG
VRIRSKWLKEKPYSGGRPCPKLDLKNQVHEAVPCYSECDQYSWVVEHWSPCKINNELRSP
RCGRGTQSRRIRCVSTADREGGAVDRSLCNQDDAPPETQACSLLCPSECVMSEWGTWSKC
PQSCDPHATQRRTRHLLRPSLNSRTCGEDSQVRPCLLNENCFQFQYNLTEWSTCQLSENI
SCGQGVRTRLLSCVRSDGKPVSMDHCEERNLDKPQRMSIPCLVECVVNCQLSGWTTWTEC
SQTCGQGGRMSRTRFIIMPTQGEGRRCPTELTQQKPCPVTPCYSWVLGNWSACKLEGGDC
GEGVQVRSFSCVVHNGSISHTAVQVEDTLCGEVPFQEGLQKQLCSVPCPGDCHITPWSEW
SKCELTCIDGRSFETTGRQSRSRTFIIQSFENQDSCPQQVLETRPCAGGKCYHYTWKASL
WNNNERTVWCQRSDGLNVTGGCSPQARPAAIRQCIPACKKPFSYCTQGGVCGCEQGYTEI
MRSSGFLDYCMKVPGSEDKKADVKTFSGKNRPVNSKIHDIFKGWSLQPLDPDGRVKIWVY
GVSGGSFLIMIFLVFASYLVCKKPKPHQSTPRHQKPLTLAYDGDLDM
NT seq 4824 nt   +upstreamnt  +downstreamnt
atgtttccaaggagtgatctggccgtcactcactgggtttcgaggagcatgaggaaggtc
tttctagtgctttctctcctgctgtcccaagcagctcatttggaaggcaggaaggacaat
cagttcatctggaaaacaggtccctggggaaggtgtgcaggtgactgcggaccaggcgga
acccagagtcgcgctgtgtggtgctttcacatagaagggtggacgagtcccatggcgaac
tgtgatgagagcagccgacctccgaaggaaaggagctgtttccgcgtgtgtgactggcac
agtgacctcttccagtgggaggtttcagactggcaccgctgcctgctggttcctggggcc
caaggagagcccaggcctcgggctgtggagtgtgtgactgcgcagcacggtctacagcac
cggacagtgcgctgtcttcagaagctcaacagaaccatggtggccagtgagatctgtgaa
cactttgttcctcagcctcccacagagcaagcctgcctcatcccttgccccagggactgt
gttgtatctgagttctccccgtggtccacctgccctgaagggtgtgggaagaagctgcag
catagaactcgtgtggccatcgcaccccctctgtatggaggtctgcagtgcccaaatctc
actgagtccagagcctgtgaggctccaatttcctgtcctcttgggaaagaggaatattcc
ttcagccttaaggtgggaccatggagcaagtgtagactccctcaccttaaggaagccgag
ctcggcggaagaaatgtccaggattttagctctgattcaaacgagcaagtcaccctaaca
catcagagttacaaagcacagcaccactcccagcctggggctatagagataggtttccaa
accaggcaggtgtggtgcaccagaagtgatggaagaaacgccctgttaagcctttgtatg
cgagattccttcccacttactgtccagccttgtgtgatgccaaaggactgtgagacttct
gaatggtctccgtggagcccctgctccaagacctgccgttctgggactctatcacctgga
gtaaggagcaggagccggaacgtgaagcatattgcaattggaggtggccaggaatgccca
gaactacttgagaaagagacctgcattgctgaaggggaatttctgcaaccatgtcccagg
tattcctggagaacctccgaatggaaggaatgtcaagtctctcttcttctggagcaacag
gacccactttggcataagacaggaccaatctgcggtggtgggatccagacccgggaggtg
tactgtgcccagagcttcccagcaaccatcacatcaagaaccaaggaagtctctaggcct
gtggaaagtaccttatgcttgggacctgccccctcagcctcccagctctgcaatgtccct
tgctcgacggactgcatagtatcttcctggtcagcctggggcccctgtgtttatgagaac
tgccatgatcctcaggggaagaaaggctttagaatgagacagcgccatgtgctcatggag
tctacagggcccgtggggcactgccctcatctggcagagtctgtaccttgtgaggatcca
atgtgctatcggtggcttgcctcagaagggatctgcatccctgatcacggaaaatgtggc
ctgggacatcgtatcctcaaggctgtctgtcagaatgagcgaggagaagaagtatcaggg
ggtctctgtccagtgcctcctcctcctgaaaggatggcttgtgaaatcccctgccgaatg
gactgtgtagtgagtgagtggacagtatggtcatcctgctcccagtcctgttcaaataaa
aattcagatgggaaacaaaccagatcacgttctatcgtagctttggctggagaaggtgga
aagccctgccctggtagtcaggaactccaagagtaccgtctatgcaatgatcactcctgt
gcacagctctactgggagacatctgcttggggatcctgctctgaaaatactcttgtgact
gccctcaatatgtccattggctggaatggagaagcaacatgtggggttggcattcagaca
cggaaggtcttctgtatcaagagtcatgtgggacaagtgatgaccaaaagatgtccagag
tctacacggccagaaactgtgagaccttgtttcctcccgtgcaagaaagactgccttgtc
actgctttcagtgagtggagaccatgcccatggccctgccagccaggaaataccacaata
aaacagtctcgatacaggattatcattcaggaagcagccaatggaggtcaagagtgccca
gataccttatttgaagaaagagagtgtgaagatatctcattgtgccctacataccggtgg
aagccacagaaatggagcccttgtatcctggttccagagtctatcaggcaggggagaaca
ggcaccagtgaggcatgtgggaaggggctgcagacaagagacgtctcatgcatctctgat
gataaccagtctgcagaaatgacagaatgcctcaggcagatgaatggcatgccacccctc
gtgcaggaatgcaccattgcctgccgggaagactgcaccttcaccccttggtctaagttc
actccctgctccaagaactgtgaggcaacccagatcaggaggcggcagctcacagggaaa
agcaggaagaaagagcggtgccaggatgcgtccctgtaccctctggtggaattggaacca
tgcccctgtgatgcattcatgtctcatccttatggaaactggtcagcttgcattctgcca
gaaggcaaaagggatcctcagcaaggaggactgtgggtacaaggagacgacaaagaatgt
ggagaaggcgtacgctttcgagcaatagcatgcactgatataaatggaagacctgttgac
ccctccttctgcaacagctctggttatatccaagaagcatgtgtcatcccttgcccattt
gattgcaaattaagtgactggtccagctggggttcttgcagctcatcttgtgggattgga
gtgaggattcgatcgaaatggctaaaagaaaagccttacagtggaggtcggccatgtccc
aaactggatctcaagaaccaggttcacgaagcagtcccatgttacagtgaatgcgatcag
tattcctgggttgtagaacactggtctccatgcaagatcaacaatgagctgagatcccca
cgctgtggaagaggaacacaatccagaagaatcaggtgtgtgagtactgctgacagagaa
ggaggggcagtggacaggagcctgtgcaaccaggatgatgctcccccagagacccaggcc
tgttctcttctgtgtcctagtgagtgcgtcatgtctgagtggggaacatggagcaaatgc
ccacagtcatgtgacccccatgcaacacagagaagaactcggcatctgctgaggccctcg
ctgaactcaagaacttgtggggaagactcgcaggtgcggccctgtctgctcaatgaaaac
tgtttccagttccagtacaatctgacagagtggagcacatgccaactgagtgaaaacatt
tcctgtggccagggtgtgaggacccgcctgctgagctgtgtgcgcagtgatggcaagcct
gtcagcatggaccactgtgaggagcgtaatctggacaaaccccagaggatgagtattccc
tgtctggtggaatgtgtggtcaactgtcagctctcaggatggacgacatggacagagtgt
tcccaaacctgtggtcaaggaggtcgaatgagccggactcgatttatcattatgccaacc
caaggagaaggccgacgatgccccacagaactcacccagcagaaaccctgcccagtgaca
ccctgctatagctgggtccttggcaactggtctgcatgtaaattggagggtggagattgt
ggggaaggagtccaggtgcgcagcttttcctgtgtcgtccacaatggctcaatatcccac
acagctgtccaagtggaagacaccctgtgtggagaagtacccttccaagaaggactccag
aagcagctgtgctctgtgccttgcccaggagactgccacattaccccatggtcggagtgg
agcaaatgtgagctaacctgcattgacggaagaagcttcgagaccacgggccgccaatct
aggtcaaggacattcataatccagtctttcgagaatcaagatagctgcccccaacaggtt
ctagaaacacgaccatgcgcaggtggcaaatgttatcactacacatggaaagcaagtctt
tggaacaataacgaacggactgtgtggtgccagcgatcagacggccttaatgtcacaggt
ggctgttcccctcaggcacgccctgctgctattcggcaatgcattccagcttgcaagaaa
cctttctcctactgcacacagggtggagtttgtggctgcgagcaggggtacacagagata
atgagatcaagtggcttcctggattactgcatgaaggtacccggctcagaggataaaaaa
gctgatgtgaaaaccttctctgggaaaaaccgacctgtgaactccaagattcatgatatt
tttaaaggatggtctcttcaacctcttgacccagacggccgagtaaaaatttgggtttat
ggcgtttccggtggcagttttcttatcatgatcttcctagtatttgcttcctatcttgtt
tgcaagaagccaaaaccacatcaaagcacacctcgccatcagaagccactgaccttggcc
tacgatggagacttggacatgtaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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