KEGG   Rattus norvegicus (rat): 289196
Entry
289196            CDS       T01003                                 
Symbol
Tmco1
Name
(RefSeq) calcium load-activated calcium channel
  KO
K21891  calcium load-activated calcium channel
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    289196 (Tmco1)
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    289196 (Tmco1)
Membrane trafficking [BR:rno04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Multi-pass translocon (MPT) complex
    289196 (Tmco1)
Transporters [BR:rno02000]
 Other transporters
  Pores ion channels [TC:1]
   289196 (Tmco1)
SSDB
Motif
Pfam: EMC3_TMCO1 DUF5683 DUF6809 Vpu Exonuc_VII_L ArsP_1 Nucleoside_tran DivIC Peptidase_S49_N SLC52_ribofla_tr DUF4257 Folate_carrier
Other DBs
NCBI-GeneID: 289196
NCBI-ProteinID: NP_001009631
RGD: 1359178
UniProt: Q5I0H4 A6IDL2
Position
13:81993172..82016496
AA seq 188 aa
MSTMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITES
AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT
PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP
PPPSGKFS
NT seq 567 nt   +upstreamnt  +downstreamnt
atgagcaccatgtttgcagacacgctgctcatcgtttttatctccgtgtgcaccgcgctg
ctcgccgagggcataacctgggtcctggtttacaggacagacaaatacaagagattgaag
gcggaagtggaaaaacaaagtaaaaagttagagaagaagaaggaaactataacagagtca
gctggtcgacaacaaaaaaagaagatagagcgacaagaagagaaactaaagaacaacaat
agagacctgtcaatggtgcggatgaaatccatgtttgcgattggcttttgttttactgcc
ttaatgggaatgtttaattccatatttgatggtagagtggtggcaaagctccccttcact
cctctctcttacatccaaggactgtctcaccgaaacctgctgggcgatgacaccacagac
tgctccttcatcttcctgtatattctctgtactatgtccattcgacaaaacatccagaag
attcttggccttgccccttcacgagctgccaccaagcaggctggtggatttcttggcccc
ccacctccttctggaaagttttcctga

DBGET integrated database retrieval system