KEGG   Rattus norvegicus (rat): 289201
Entry
289201            CDS       T01003                                 
Symbol
Lmx1a
Name
(RefSeq) LIM homeobox transcription factor 1-alpha
  KO
K09371  LIM homeobox transcription factor 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    289201 (Lmx1a)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain LIM
    289201 (Lmx1a)
SSDB
Motif
Pfam: LIM Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 289201
NCBI-ProteinID: NP_001099437
RGD: 1304784
Ensembl: ENSRNOG00000004642
UniProt: F1LRJ8
Position
13:82367493..82511157
AA seq 382 aa
MLDGLKMEENFQSAIETSASFSSLLGRAVSPKSVCEGCQRVISDRFLLRLNDSFWHEQCV
QCASCKEPLETTCFYRDKKLYCKYHYEKLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCF
CCCVCERQLQKGDEFVLKEGQLLCKGDYEKERELLSLVSPAASDSGKSDDEESLCKSAHG
AGKGASEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ
VWFQNQRAKMKKLARRQQQQQQDQQNTQRLSSAQTNGSGNAGMEGIMNPYTTLPTPQQLL
AIEQSVYNSDPFRQGLTPPQMPGDHMHPYGAEPLFHDLDSDDTSLSNLGDCFLATSEAGP
LQSRVGNPIDHLYSMQNSYFTS
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgttggacggcctgaagatggaagagaactttcaaagtgcgattgagacctcggcctcc
ttctcctctttgctgggcagagcggtgagccccaagtctgtctgcgagggctgtcagcgg
gtcatctcggataggtttctgctgagactcaacgacagcttctggcacgagcaatgcgtg
cagtgcgcctcttgcaaagagcccctggagaccacctgcttctaccgggacaagaagctc
tactgcaagtaccactacgagaaactgtttgctgtcaaatgtgggggctgcttcgaagcc
attgcgcccaatgagtttgtcatgcgtgcccagaagagtgtgtaccacctgagctgtttc
tgctgctgtgtctgcgagcgacagctgcagaagggtgatgagtttgtcctgaaggagggc
cagctgctctgcaaaggagactatgagaaggagcgagagttgctgagcctggtgagccca
gcagcctcagactcaggcaaaagtgatgatgaggagagtctttgcaagtcagcccacggg
gcagggaaaggagcatcagaggacggcaaggaccataagcgacccaaacgtcccagaacc
atcttgaccactcagcagaggagagcattcaaggcctcatttgaagtatcctccaagccc
tgcagaaaggtgagggagactctggctgcggagacagggctgagtgtccgtgtggttcag
gtgtggttccagaaccagcgagccaagatgaagaagctggcccggcgacagcagcaacag
caacaggatcaacagaacacccagaggctgagttctgctcagacaaatggtagtggcaat
gctggcatggaaggcatcatgaacccctatacaacgttgcccaccccacagcaactgctg
gccattgaacagagcgtctacaactctgatcccttccgacagggtctcaccccaccccag
atgcctggagatcacatgcacccctacggtgctgaacctcttttccatgacctggatagt
gacgacacatctctcagtaacctgggcgactgcttcctggcaacctcagaagctggaccc
ctacagtccagagtgggaaaccccatcgaccatctgtattccatgcagaattcctatttc
acctcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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