KEGG   Rattus norvegicus (rat): 289257
Entry
289257            CDS       T01003                                 
Symbol
Spta1
Name
(RefSeq) spectrin alpha chain, erythrocytic 1
  KO
K27408  spectrin alpha, erythrocytic
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    289257 (Spta1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     289257 (Spta1)
  Intermediate filaments
   Intermediate filament-binding proteins
    289257 (Spta1)
SSDB
Motif
Pfam: Spectrin EFhand_Ca_insen SH3_1 SH3_9 EF-hand_7 SH3_2 EF-hand_6 EF-hand_1 SH3_3 SH3_10
Other DBs
NCBI-GeneID: 289257
NCBI-ProteinID: NP_001011908
RGD: 1305194
Ensembl: ENSRNOG00000003537
UniProt: Q6XDA1
Position
13:88735833..88811697
AA seq 2415 aa
METPKETAVESSGPKVLETAEEIQHRRQEVLDQYQRFKERVAERGQKLEESYHYQVFRRD
ADDLEKWIMEKLEITKDKTYEPTNIQGKYQKHESFVSEVQAKSRVLPELEEIREARFAED
HFAHEATKTHLKELRHLWDLLLELTQEKSDILLRALKFYQYCQECEDILEWVKEKEAIVT
LVELGDDWERTEVLHKKFEEFQEELTARKGKVDRVNQYANECAQEQHPKLPEIKAKQDEV
NAAWDRLWSLALKRRESLSNAADLQRFKRDVNEAIQWMEEKEPLLTSEDYGKDLVSSEAL
FHSHKRLERNLAVMDDKVKELCAKADKLMVSHSADAPQIQQMKMDLVSNWELIRALATNR
YAKLKASYGYHRFLSDYDELTGWMEEKTALINADELPTDVASGEALLARHQQHKHEIDSY
DDRFQTAEATGQDLLDGNHEASDEIREKMTILAHDWAALRELWNKCQHQYRQSLDFHLFY
RDSEQVDSWMSRQEAFLENEDLGNSVGSVEALLQKHDDFEEAFTAQEEKIITLDETATKL
IDNDHYDSENIAAIRDGLLARRDALRERAATRRKLLVDSQLLQQLYQDSDDLKTWINKKK
KLADDEDYKDVQNLKSRVQKQQDFEEELAANEIMLNNLERTGQDMIENDHYASDAVAARM
SEVANLWKELLEATAQKGTQLYEANQLLQFENNAEDLKRWLEEVERQVASEDYGKGLADV
QNLLRKHGLLESAVLARQDQVDTLTDMAAHFEEIGHPDSENICARQESLLSRFEALKEPL
ATRKKKLIDLLKLQQICRDSEDEEAWIQETEPSAASTHLGKDLVAAKNLLNRHEVILADI
ASHEPRIQTITERGNKMVEEGHFASEDIASRVESLNKNMESLRARAIRRENDLKANVQLQ
QYLADLHEAEAWIKEKEPIVDNKNYGADEEAAGALLKKHEAFLVDLNAFGNSIKALGDQA
EACQQQQAAPVDEAGREARVIALYDFEARSRREVSMKKNDVLTLLSSINKDWWKVEADDH
QGFVPAVYVRKLAHDELPGFPQQRREEPVNIPQLQEQIETLYHSLLDRAEERRRRLLQRY
NEFLLAYEAGDMLEWIQEKKTENTGVELDDVWELQKKFDEFQRDLKSNEPRLKDINKVAD
ELLFEDLLTPEGSHIRQELNTRWSSLKRLADEQYQLLSSAHAVEMFLREADDVKEQIDKK
CQALNAADPGSDLLSVQALQRQHEVFERDIIPLGEKVTTLGETAERLCESHPDATEDLQK
QRTELNEAWDTLQGLTSDRKESLNEAHKFFLFLSKASDLENWIKAIGGVISSPELAEDLT
GTEILLERHQEHYDDIKREDPTFQALEDFGRELIDRGHRNSHEIETTLQDIKLKRDDLEK
NWENRKKMLDQCLELQLFRGKCEQVESWMVARENSLRSDDRDHLNSLQALMKKRDDLDKA
IAAQEGKIADLENHATRLMDNDHYAKEEIAARLQRVLDRWKDLKTQLLAELGKLGDYADL
KQFYRDLEDLEEWISEMLPVACDESYKDPTNIQRKYLKHQAFENEVNGRAEQVEGVINLG
KSLIERRVCDGDEENMQEQLDKLKENWDYLLERTTDKGQKLNEASRQQRFNTSIRDFEFW
LSEAEGLLAMKDQARDLTSAGNLLKKHQLLEAEMLAREDPLKDLNGLAKELISSGTFNIE
QIEEKMNGVNERFKNVQSLAAAHHEKLKETYALFQFFQDLDDEEAWIEEKLLRVSSQDCG
RDLQSVQNLLKKHRRLEGELVAHEPAVQNVLDTAESLKDKAAVGKEEIQERLAQFVQHWE
KLKELAKTRGVNLEESLQYLQFMENAEEEEAWLGEKDALVSRGDSGDTLAATQSLLKKHE
ALENDFAVHKNRVQDVCAQGEDILSKEETQNKDKISTKIEVLNEKTASLTKALAAWKSQL
DEVHAFQQFNWKADVVESWIGEKEASLKTKSNGADLTAFLTLLAKQDTLDASLQSFQQER
LSEITDLKDELLAAEHSQSKAIEERHAALLRRWEQLLEACRVHRQKLLEKQLPLQKAEEL
FMEFAHKASAFNNWCENAEEDLSEPVHCVSLNEIRQLQKEHEAFLASMVGAQEDFNYLLA
LDQQIKALNVSSSPYTWLTVDVLGRIWKHLPEIIKEREQELQKEEARQIKNFEMCQEFEQ
NASAFLQWIQETRAYFLDGSLLKETGTLESQLEANKRKQKEIQAMKRHLTKIEDLGDSME
EALILDIKYSTIGLAQQWDQLHQLGMRMQHNLEQQIQAKDTIGVSEETLKEFSTTYKHFD
ENLTGRLTHKEFRSCLRGLNYYLPMVEEGEPEPKFEKFLNAVDPGRKGYVSLEDYTSFLI
DKESENIKTSDDIESGFQALAEGKAYITKEDMKQALTPEQVSFCTIHMQQYMDPRGRSQP
AGYDYVGFTNSFFGN
NT seq 7248 nt   +upstreamnt  +downstreamnt
atggaaactccaaaggaaactgctgttgaaagcagtggaccaaaggttctagaaacagca
gaagaaatccagcacaggaggcaggaggtgttagaccaataccagaggttcaaggagcgc
gtggccgagaggggtcagaagcttgaggaatcttatcactatcaagttttcaggagagat
gcagacgacctggagaagtggatcatggagaagcttgaaattacaaaagataagacatat
gaacccacaaatatacaggggaaatatcagaagcacgaatcctttgtatcagaggtgcaa
gccaaatcaagagtgcttcctgagctggaggaaatcagggaggctcgatttgcagaagat
cattttgcccatgaagccaccaagacgcatctgaaggaacttcgccacttgtgggatctg
ctgttggagttgacccaagagaaaagtgacatcctgctgagggcactgaagttctatcag
tactgtcaggagtgtgaagacatcttggagtgggtcaaagagaaggaagctatagtgaca
ttagtggagctgggagatgactgggaacgaacagaggtcctgcataagaagtttgaagaa
ttccaggaagaactgacagctcggaaaggaaaagtggacagagtgaaccaatatgctaat
gagtgtgcccaggagcaacaccctaagttgcctgagataaaggcaaaacaagatgaagtc
aatgctgcctgggatcgtctctggagcctggctctcaagagacgagaaagtctatcaaat
gctgcagacctccagcgctttaaaagggatgtcaatgaagccatccagtggatggaggag
aaggagcctctactcacctctgaggactatggcaaagatcttgttagttctgaggctctg
tttcacagtcacaagaggctcgagaggaatcttgctgtcatggatgacaaggtgaaggag
ctttgtgccaaagcagacaagctgatggtttcccactctgcagatgcacctcagatccag
cagatgaaaatggatctagtctccaactgggaactcatccgcgccttggccactaacaga
tatgcaaagctgaaggcttcttatgggtaccatcggttcttatctgactatgatgagctc
acaggctggatggaggaaaagacagctctgatcaatgctgatgagctgccaacagatgtg
gccagtggggaagccctgctagccaggcaccagcagcataagcatgagattgactcctat
gatgatcgatttcaaactgctgaggcaactggtcaagatctgctggatggcaatcacgaa
gcctcggatgaaattcgagagaagatgacaatacttgcccatgactgggctgccctgcgg
gaactctggaacaagtgtcagcatcagtaccgccagagtctggatttccacctcttctac
cgagacagcgaacaagtggatagttggatgagcagacaagaggcttttctggaaaatgaa
gacctgggaaactcagtgggtagcgtggaagcccttcttcagaagcatgatgactttgaa
gaagcattcactgcccaggaagaaaagattataaccttggatgagactgcgaccaagctc
atagacaatgaccactatgactccgagaacattgctgctatccgtgatgggctcctggcc
agacgtgatgccctgcgtgaaagggctgccaccagaagaaaattgttggtagattcacaa
cttctccaacaactgtatcaagactcagatgacctaaaaacctggatcaataagaagaag
aagttagctgatgatgaagattacaaggatgtacagaacttgaagagccgggttcagaag
caacaggactttgaagaggaattggcagcaaatgagattatgctcaacaacctggagaga
actggccaggacatgattgagaatgatcactatgcctctgatgctgtggctgctcgcatg
agcgaggtcgccaacctctggaaggagttgctggaagcaacagcacaaaaagggacacag
ctgtatgaagccaaccagctgctacaatttgagaacaatgcggaagacctgaagcgctgg
ctggaggaggtggagcggcaggttgcctctgaggattatgggaaaggtctggccgatgtg
cagaatctactgagaaaacatggcctcctagagtcagctgtgcttgctcgccaggatcaa
gtggacaccctcacagacatggctgcacattttgaagaaataggacatcctgactctgag
aatatatgtgcaaggcaagaatccttgctttctcgttttgaggctctgaaagagccactg
gccactcggaagaagaaactcattgacctactcaagctacagcagatttgcagagactca
gaagatgaggaggcctggatccaggagactgagccctcagcagcttccactcatcttggc
aaggacttggttgcagccaagaatcttctaaacagacatgaagtcattttggcagacatt
gccagccatgaaccacggattcaaaccataacagagaggggaaacaaaatggtggaggaa
ggacacttcgcttcagaagacatagcatctagggttgagagcttgaacaaaaatatggag
tctctccgtgctcgtgctattagacgggagaatgaccttaaggccaatgtccagctccaa
cagtacctggcagatctgcatgaagcagaagcatggattaaagagaaagaacccattgta
gacaacaaaaattatggagctgatgaagaagcagctggggcccttctcaaaaagcatgag
gccttcctggtggacctcaacgcatttggaaacagcataaaggctctgggggatcaggca
gaggcctgccagcaacaacaggcagcaccagtggatgaggctggtcgagaagctagggtc
atagctctgtatgactttgaggctcgcagccgtagagaggtcagcatgaagaagaatgat
gtcttaactctgctcagttccatcaacaaggactggtggaaggttgaagctgacgatcac
cagggctttgtgccagcggtctatgtcaggaaactggcacacgatgaactcccagggttc
ccacagcaacggcgagaggaaccagtcaacatccctcagctccaggagcagatcgagacc
ctgtaccactccctcctagatcgggcagaagaacgcaggcgtcgcctgctgcagcggtac
aatgagtttctgctagcctatgaggcaggagacatgttggagtggatccaagagaaaaag
acagaaaacactggggtggaactggatgatgtttgggaactgcagaagaaatttgacgag
ttccagagggatctgaagagcaacgagcctcggttaaaagatatcaataaggtggctgat
gaactgctctttgaagacctcctaaccccagaaggatctcacatacggcaggagttgaac
acccgctggagttccttgaagaggctggcagatgagcagtatcagctgctgagcagtgca
catgccgttgagatgtttctcagagaagcagatgatgtcaaggaacagattgataagaaa
tgccaggctctcaatgctgctgaccctggctctgacctgctcagtgtccaggccctccag
aggcagcatgaggtctttgagagagacatcatccccctgggagaaaaggtgacgacactg
ggggagacagctgagcgtctctgtgaatcacaccccgatgccactgaggacttacagaag
cagcgaacagagctgaatgaggcttgggatacgctacaaggtcttaccagtgatcgaaag
gagagtctgaatgaagctcataaattcttcctcttccttagcaaggccagtgatctagag
aattggatcaaggccattggtggtgtaatatcatcacctgagctggctgaggacttaact
ggcacagagatcttgctggagcgacaccaggagcattatgatgacataaaaagagaagac
cccactttccaagccttagaagactttggtagagaacttatagacagaggccaccgtaat
agccacgaaattgaaactactctccaggatattaaattaaagagagacgatttggaaaag
aattgggaaaaccgcaagaagatgctagaccagtgcctagaactgcagctgttccgaggg
aagtgtgaacaggttgagagctggatggtggcacgtgagaattccctgaggtcagatgac
agggatcacttaaacagtctacaggctttgatgaaaaaacgggatgacctggacaaagca
atcgctgctcaggaagggaagattgctgacctagagaaccatgccacaaggctcatggac
aatgaccactatgctaaggaagagattgctgctcgcctccaacgtgtactagacaggtgg
aaggatctcaaaacacagctgcttgctgaactgggaaagctaggagactatgccgacctg
aaacagttctatcgtgacctcgaggacctggaggaatggatcagtgagatgctgcccgta
gcctgtgatgaatcttacaaagatcccactaatatccagaggaaatatctgaaacatcaa
gcctttgaaaatgaagtcaatggccgtgccgagcaggtggaaggggtcatcaacctgggg
aaatccctgattgagcgcagagtgtgtgatggggatgaagagaacatgcaggagcaactg
gacaaactaaaggagaactgggactatctcctagagagaacaactgacaaagggcagaag
ctcaacgaggccagtcggcagcaaaggttcaacacaagtatccgggactttgagttctgg
ctttcagaggcagaaggcttgctggccatgaaggatcaggccagggacttaacttcagca
ggaaacctacttaagaagcatcagctattggaagcagagatgttggcacgagaggaccct
ctcaaagatctgaatggtctggctaaggagctgatctccagtgggactttcaacattgag
cagatagaagagaaaatgaatggtgtcaatgagcgtttcaaaaatgtccagagtttggca
gctgcacaccatgagaaactgaaagagacctatgccttattccagttcttccaagacctg
gatgatgaggaagcctggatagaggagaagttgctacgagtgagctcccaggactgtggg
agggatcttcagagtgttcagaacttactgaaaaaacacagacgcctagagggggagctg
gtggcacatgaacctgctgtccagaatgtgctggatacagcagaaagcctgaaagacaag
gctgctgtagggaaagaggagatccaggagcgactggctcagtttgtccagcattgggaa
aagctcaaagaattggcgaagacacgaggggtgaatttggaggagtctcttcagtatctg
caattcatggagaatgcagaggaagaagaagcatggctgggtgaaaaggatgcactggtt
agccgaggagattctggagacacactggctgctactcagagtttgctaaagaagcacgaa
gctttggagaatgactttgctgtacacaagaaccgggtacaagatgtttgtgcacaagga
gaagacattctcagtaaggaagaaactcaaaacaaggataagatttccaccaagattgaa
gttctgaatgaaaagacagcatctctgaccaaggccttagctgcttggaagtcacagctg
gacgaagtgcatgcctttcagcagtttaactggaaggctgatgtcgtggaatcctggata
ggtgagaaggaggcaagcctgaagaccaagagcaatggtgcagacctcactgccttcctc
acactcctggcaaagcaagacacgctggatgccagtcttcagagcttccagcaagaaagg
ctttctgaaatcactgatctgaaggacgagctgctggctgctgagcacagccaaagcaaa
gccattgaggaacggcacgcagccctgctgaggcgctgggaacaactgctggaggcatgt
agagttcacaggcagaagctattggagaagcagctgcctctacagaaggctgaggagcta
ttcatggaatttgcacacaaagcttcagccttcaacaactggtgtgagaacgctgaagag
gacttgtcagaacctgtgcattgtgtctctctaaatgagatccggcagctgcagaaggag
catgaagccttcttggcctctatggttggggctcaagaggatttcaactatttgttggca
ctagaccagcaaattaaagccttaaatgtgtcctccagtccttatacctggttaacagtg
gatgtgctgggcaggatctggaagcacctacctgaaatcatcaaggaacgggagcaggag
ctacagaaagaagaggctaggcagatcaagaattttgaaatgtgccaggagtttgaacag
aatgccagtgccttccttcagtggatccaggagaccagggcttattttctggatggatcg
ttgctcaaggaaacaggaactctggaatcccaacttgaagcaaataaaaggaagcagaag
gagattcaagcaatgaagcgtcatctcaccaagattgaagacctgggggacagcatggaa
gaggctttgatccttgatatcaaatacagcaccattggactggcccagcagtgggatcag
ctgcaccagctggggatgcgaatgcagcacaatttggagcaacagattcaagccaaagac
accataggtgtgagtgaggagacactgaaagaatttagcaccacatataaacacttcgat
gagaatttgacagggcgattgactcacaaagagttccggtcatgcctgagaggactcaac
tactatttgcctatggttgaggaaggtgaacctgagcccaagtttgagaaatttctgaat
gctgtggatccagggaggaaaggctatgtgtcactggaggactacacatcattcctgatt
gacaaggagtcagagaatatcaagacaagtgatgacatagagagtggattccaagccctg
gcagaaggcaaggcctacattaccaaggaggacatgaaacaggctctaaccccagaacaa
gtgtcattctgtaccatacatatgcagcaatatatggacccgcggggtcggagccaacct
gctggctacgactatgttggcttcaccaattcattctttggcaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (10)   
   Pfam (10)   
All databases (32)   

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