KEGG   Rattus norvegicus (rat): 289315
Entry
289315            CDS       T01003                                 
Symbol
Sde2
Name
(RefSeq) UBL fusion protein SDE2
  KO
K25059  replication stress response regulator SDE2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    289315 (Sde2)
   03032 DNA replication proteins [BR:rno03032]
    289315 (Sde2)
   03400 DNA repair and recombination proteins [BR:rno03400]
    289315 (Sde2)
Spliceosome [BR:rno03041]
 Complex C
  Other components
   Complex C specific factors
    289315 (Sde2)
DNA replication proteins [BR:rno03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    289315 (Sde2)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    289315 (Sde2)
SSDB
Motif
Pfam: SDE2_2C Sde2_N_Ubi Exonuc_VII_L
Other DBs
NCBI-GeneID: 289315
NCBI-ProteinID: NP_001020141
RGD: 1305572
Ensembl: ENSRNOG00000003247
UniProt: Q5BJN8 A6JGH9
Position
13:95110598..95126929
AA seq 448 aa
MAEAAVLAWVRGPGTAWKALPCASVGCSVRDVIYRHCEEQEIPVECFFVKCNGVLVAAGD
KVCHGAVYSLEPRLRGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAE
WVKQQAEREAEKEQRRLERLQRKLAEPAHCFASPDYQRQCHEMAERLEDSVLKGMQAASS
KVVSAEVTETRKRPNRSKTDQGAGAKKKRCFWLGMEGLEAAEGSSTGSSDDSEDDDHEDA
PGTSGPSCCARENGSDGGEVAADSPGSVQSSGSGTRSESPKELQNPMTEPGQGILENTGT
EPGETSTREHNERKTVTVTETEETPARKETESPEPTEKGQETGVIGEDRAAMALSGEDRK
SIPAATPEGSNSGDTALGVEALDLSAFSCAAELELLGLERLKCALMALGLKCGGTLQERA
ARLFSVRGLSKELIDPTLFAKPSKGKKK
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggcggaggctgctgtgctggcgtgggttcgcggccccggtaccgcgtggaaggcgcta
ccgtgtgcctcggtcgggtgctcagtgcgcgatgtaatctaccgacactgcgaagaacag
gaaattcctgtggaatgcttctttgtgaagtgcaatggagtcctcgttgctgctggtgac
aaggtgtgccatggagctgtgtacagtttggagcccaggcttcgagggggcaaaggaggt
ttcgggtctatgcttcgagcacttggtgcacagattgaaaagacaaccaatcgagaagcc
tgccgggatctcagtgggaggagattacgagatgtcaatcatgagaaagcgatggccgag
tgggtaaaacagcaagctgagcgagaggctgaaaaggagcaaaggcgcctggagagactg
cagcgaaagcttgcagagcctgcacactgctttgccagccctgactaccagaggcagtgc
catgaaatggctgagcgtctggaggattcagtcctcaaaggtatgcaggctgcctccagc
aaggtggtgtcagcagaggtcacggagactcgaaaacggcctaacaggtcaaagacagac
cagggagctggtgcaaagaaaaagaggtgcttttggttgggcatggaaggactggaggct
gccgagggatccagtactggcagttcagatgacagtgaagatgatgaccatgaagatgct
cctgggacctcggggcctagctgctgtgcccgggaaaatggcagtgatggtggggaggtg
gcagcagactctcctggcagtgttcagagctcaggatctggtacacgctctgagtcgcct
aaagagcttcagaaccccatgactgagcctgggcagggcattttggagaacacaggaact
gagccaggagagacatctaccagggagcacaatgagaggaagacggtcacagtcacagaa
acagaggagaccccagcaaggaaggaaacagagagtcccgagcccacagaaaagggccaa
gagacaggagtgattggtgaagacagagctgccatggctttgtctggagaagacaggaaa
agcatccctgctgctaccccagagggaagcaactcaggagacacggctcttggtgtggaa
gctctggatctgtcggcattcagctgtgcagccgagttggagttgctgggtttggagagg
ctcaagtgtgcactgatggcccttggactgaagtgcgggggaaccctgcaggagcgtgcg
gccagactcttctctgtcagaggcctctcaaaggagctcattgacccaactttatttgcc
aagccttcaaaagggaagaagaagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (16)   
   RefSeq(nuc) (6)   
   GenBank (5)   
   EMBL (5)   
Protein domain (3)   
   Pfam (3)   
All databases (39)   

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