KEGG   Rattus norvegicus (rat): 289693
Entry
289693            CDS       T01003                                 
Symbol
Dhx15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
  KO
K12820  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    289693 (Dhx15)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    289693 (Dhx15)
   03009 Ribosome biogenesis [BR:rno03009]
    289693 (Dhx15)
Spliceosome [BR:rno03041]
 Complex A
  U2 snRNP components
   U2 related factors
    289693 (Dhx15)
 Complex B
    289693 (Dhx15)
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    289693 (Dhx15)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  90S particles
   Helicases
    289693 (Dhx15)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C HA2_N DEAD AAA_22 AAA_19 SRP54 nSTAND3 Atrophin-1 AAA_29 Flavi_DEAD AAA_25
Other DBs
NCBI-GeneID: 289693
NCBI-ProteinID: NP_001178526
RGD: 1308072
Ensembl: ENSRNOG00000003844
UniProt: A6IJI2 D3ZD97
Position
14:62999886..63037829
AA seq 795 aa
MSKRHRLDLGEDYPSGKKRAGTDGKDRERDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgtccaagaggcatcggttggacctgggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaagaccgggaacgagatcgggatagagaggaccgatctaaagatcga
gaccgagaacgtgatagaggagacagagaacgggagagggagaaagaaaaggaaaaggaa
ttgagagcttccaccaatgctatgcttatcagtgctggattgccacctttaaaagcttct
cattccgctcattcaacccactccgctcattcaacacattctacacattctgcccattca
acacacaccggacatgcaggacacacatcacttccacagtgtattaatccatttaccaac
ctgccccatactcctcgatattatgatattctaaagaaacgtcttcagctccctgtttgg
gaatacaaggatagatttacagatattcttgttagacatcagtcatttgtactggttggt
gagactgggtctggtaaaacaacacagataccacagtggtgtgtggagtatatgcgatcc
ttgccaggacccaaaaggggagttgcctgtacacagcccaggagagtggctgcaatgagt
gtggctcagagagttgctgatgagatggacgtgatgttaggccaggaagttggatactcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgacgggatg
ctccttcgtgaagctatgaatgatcccctcctggagcgttatggtgtgataattcttgat
gaggcccatgaaagaacattagctacggatattcttatgggtgttctaaaggaagttgtg
agacagagatcagatttaaaggttatagttatgagtgctaccctagatgctggaaaattc
cagatttactttgataactgtcctctcttaactatacctggccgaacacatcctgttgag
attttttatactcccgaaccagagagagattatcttgaagcagcaattcgaacggtgatc
caaatacatatgtgtgaagaggaggaaggagaccttcttcttttcttgactggtcaagag
gaaattgatgaggcctgtaagagaataaagcgtgaagttgatgatttgggtcctgaagtt
ggtgatattaaaatcattccattatattctacacttccaccccagcagcaacagcgcatt
tttgagccaccacctccaaaaaaacagaatggagcaattggaagaaaggtggttgtgtca
actaatattgcagagacctctttgacaatagatggtgtggtgtttgttattgaccctgga
tttgcaaagcaaaaggtatataaccctagaatcagagttgagtctcttttggtgacagca
attagtaaagcctcagctcagcaaagggctggtcgagctggacgtaccagacctgggaaa
tgcttcaggctgtacacagagaaagcttataaaacagaaatgcaggataacacctatcct
gagattctgcgttctaatttaggatcagttgtattgcaattgaagaagcttggtattgat
gacttggtacattttgattttatggacccaccagctcccgaaactctgatgagagcgcta
gaacttctgaattatttggccgctttaaatgatgatggagatctgactgaattgggatcc
atgatggcagaatttcctttagatccccagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgccatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagctgcagatgaggccaagatgagatttgcccacata
gatggagatcatctgacactgctgaatgtttaccacgcttttaaacaaaatcatgaatct
gttcagtggtgttatgacaacttcattaactaccggtccctgatgtctgcagacaatgta
cgacagcagctatcaagaattatggacagatttaatttgcctcgtcgaagtactgatttc
acaagcagggactattatattaatataagaaaagcattggttactgggtattttatgcag
gtggcacatttagaacgaacagggcattacttaactgtgaaagataaccaggtggtccag
ttgcatccctctactgtgcttgatcacaagcctgaatgggtgctttataatgagtttgtg
ctcacaacaaagaattatatccgaacctgtacagatatcaagccagaatggttggtgaaa
attgcccctcaatattatgacatgagcaatttcccacagtgtgaagcaaagagacagttg
gaccgcattattgccaaacttcagtccaaggaatattcacagtactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (13)   
   Pfam (13)   
All databases (37)   

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