KEGG   Rattus norvegicus (rat): 289924
Entry
289924            CDS       T01003                                 
Symbol
Psmd6
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 6
  KO
K03037  26S proteasome regulatory subunit N7
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03050  Proteasome
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05017  Spinocerebellar ataxia
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    289924 (Psmd6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    289924 (Psmd6)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    289924 (Psmd6)
   05012 Parkinson disease
    289924 (Psmd6)
   05014 Amyotrophic lateral sclerosis
    289924 (Psmd6)
   05016 Huntington disease
    289924 (Psmd6)
   05017 Spinocerebellar ataxia
    289924 (Psmd6)
   05020 Prion disease
    289924 (Psmd6)
   05022 Pathways of neurodegeneration - multiple diseases
    289924 (Psmd6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:rno03051]
    289924 (Psmd6)
Proteasome [BR:rno03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     289924 (Psmd6)
SSDB
Motif
Pfam: RPN7 PCI RPN7_PSMD6_C LigB
Other DBs
NCBI-GeneID: 289924
NCBI-ProteinID: NP_942025
RGD: 735127
Ensembl: ENSRNOG00000006751
UniProt: Q6PCT9
Structure
Position
15:13532675..13542682
AA seq 389 aa
MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDTAVREELMAAVRENNMAPYYEALCKS
LDWQMDMDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCQIGDKEGA
LTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRL
KVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKV
IKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMR
IHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPD
SKNWQYQETIKKGDLLLNRVQKLSRVINM
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgccgctagaaaacctagaggaagagggtctgcccaagaacccggatctgcgcatcgcg
cagctgcgctttctgcttagcctgccggagcaccgcggggacacggcggtgcgcgaggag
ctgatggccgccgtccgggaaaacaatatggctccttattatgaagccttgtgtaaatcc
ctcgactggcagatggacatggatctcctcagtaaaatgaagaaagcaaacgaggaagag
ttgaaacgtctggatgaggagttggaggatgcagagaagaatctgggagaaagtgaaatt
cgagatgcaatgatggcaaaagcagagtacctctgtcagataggtgacaaggagggagct
ctgacagcctttcgcaagacatatgataagactgtggccctgggtcaccgactagatatt
gtattctatctcctaaggattggactcttttatatggataatgacctcatcactcgaaac
acagaaaaggccaaaagccttatagaggaaggcggagactgggaccggcgaaacaggctg
aaagtgtatcaaggcttgtattgtgtggctatccgtgacttcaaacaggcagcagagctc
tttcttgacaccgtttctacatttacgtcctatgagctcatggattacaagacatttgtg
acttacactgtttatgtcagtatgattgccttagaaagaccagatctcagagaaaaggtc
atcaaaggggcagagattcttgaagtgttgcacagtctcccggcagttcggcagtatctg
ttttctctctatgaatgccgttactccgttttcttccagtcgttagcggtcgtagagcag
gagatgaaaaaggactggctttttgcgcctcattaccgatactatgtgagagaaatgcgg
atccatgcatacagccagctgctggagtcatataggtcattaacccttggctatatggca
gaagcatttggtgtgggtgtggaattcatcgaccaggaactgtccaggtttattgctgct
ggaagactacactgtaaaatcgataaagtaaatgaaatagtagaaaccaacagacctgac
agcaagaattggcagtaccaagagaccatcaagaaaggagacttgctgctgaacagggtt
cagaaattatccagagtaattaacatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (9)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (15)   
   RefSeq(nuc) (1)   
   GenBank (7)   
   EMBL (7)   
3D Structure (4)   
   PDB (4)   
Protein domain (4)   
   Pfam (4)   
All databases (43)   

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