KEGG   Rattus norvegicus (rat): 289990
Entry
289990            CDS       T01003                                 
Symbol
Psmc6
Name
(RefSeq) 26S proteasome regulatory subunit 10B
  KO
K03064  26S proteasome regulatory subunit T4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03050  Proteasome
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05017  Spinocerebellar ataxia
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    289990 (Psmc6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    289990 (Psmc6)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    289990 (Psmc6)
   05012 Parkinson disease
    289990 (Psmc6)
   05014 Amyotrophic lateral sclerosis
    289990 (Psmc6)
   05016 Huntington disease
    289990 (Psmc6)
   05017 Spinocerebellar ataxia
    289990 (Psmc6)
   05020 Prion disease
    289990 (Psmc6)
   05022 Pathways of neurodegeneration - multiple diseases
    289990 (Psmc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:rno03051]
    289990 (Psmc6)
Proteasome [BR:rno03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     289990 (Psmc6)
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_16 AAA_2 AAA_22 AAA_5 PRS7_OB RuvB_N nSTAND3 Prot_ATP_ID_OB_N AAA_14 DUF815 AAA_18 AAA_11 AAA_7 AAA_33 TIP49 RNA_helicase AAA_3 TPR_MLP1_2 Mg_chelatase bpMoxR DUF5906 AAA_24 AAA_28 TsaE AAA_25 NACHT ATPase Occludin_ELL AAA_17 ATPase_2 Parvo_NS1 DUF4140 IstB_IS21 COG4_N Med4 AAA_19
Other DBs
NCBI-GeneID: 289990
NCBI-ProteinID: NP_001093979
RGD: 1308825
Ensembl: ENSRNOG00000007203
UniProt: Q32PW9 A6KDZ6 G3V6W6
Structure
Position
15:21022314..21043785
AA seq 403 aa
MALPGIPYERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND
LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLT
IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP
PKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQ
PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLD
PALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV
CTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggcccttcccggcatcccctatgagcgacggcttctcatcatggcggaccctagagat
aaggcgcttcaggactaccgcaagaagctgctagaacacaaggagattgacggccgtctt
aaggagctaagggaacaattaaaagaacttaccaagcagtatgaaaagtctgaaaatgat
ctgaaggcactacaaagtgttggacagattgtaggcgaagtgcttaaacagttaacagaa
gaaaagttcattgttaaagcaacaaacggaccaagatacgtcgtaggctgtcgtcggcag
cttgataaaagtaagctgaagccaggaaccagagttgctttggatatgaccaccctaacc
atcatgaggtatctgccgagagaggtggatccattggtttataacatgtctcatgaggat
cctggaaatgtatcttattctgagattggaggcctgtcagaacagattcgggaattaaga
gaggtaatagaattacctcttacaaatccagaattattccagcgtgtaggaataatacct
ccaaaaggctgtttgctctatggaccaccaggcactgggaaaacactcttggcacgagct
gtcgccagccagctggactgcaacttcctaaaggttgtgtcaagctctattgtagacaag
tacattggggaaagcgctcgtttgattagagaaatgtttaattatgccagggaccaccag
ccatgcatcatttttatggatgaaatagatgctattggtggtcgtcggttttctgaggga
acatcagctgacagagagattcagagaactttaatggagttactaaatcaaatggatgga
tttgacactcttcatagagttaaaatgatcatggctacaaacagaccagatacactggat
cctgctttgctgcgcccaggaagattagatagaaaaatacatattgatttaccaaatgaa
caagcaagattagatatattgaaaatccacgctggtcctattacaaagcatggtgaaata
gattatgaagccattgtaaagctttcagatggctttaatggagcagacctgagaaatgtt
tgtactgaagcaggtatgtttgcaattcgtgctgatcatgattttgtagttcaggaagac
ttcatgaaagcagtcagaaaagtggctgactccaagaagctagagtccaaactggactat
aaacctgtgtaa

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