KEGG   Rattus norvegicus (rat): 290284
Entry
290284            CDS       T01003                                 
Symbol
Sap18
Name
(RefSeq) histone deacetylase complex subunit SAP18
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  Nucleocytoplasmic transport
rno03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    290284 (Sap18)
   03015 mRNA surveillance pathway
    290284 (Sap18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    290284 (Sap18)
   03036 Chromosome and associated proteins [BR:rno03036]
    290284 (Sap18)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     290284 (Sap18)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     290284 (Sap18)
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 290284
NCBI-ProteinID: NP_001028857
RGD: 1310388
Ensembl: ENSRNOG00000064694
UniProt: G3V7F6 Q3MHS8 A6KHC9
Position
15:36058784..36063089
AA seq 172 aa
MLAAGVGGQGERLPGRRRKMAVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHH
RMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFMDLKRPGY
RVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIAITPPNRAPPSSGRMRPY
NT seq 519 nt   +upstreamnt  +downstreamnt
atgctcgccgcaggggtcggaggtcagggcgagcgtctcccgggccgaaggaggaagatg
gcggtggaatcgcgcgttacccaggaggaaattaagaaggagccggagaagccgatcgac
cgcgagaagacctgcccgctgctgctgcgggtcttcaccaccaacaacggccgccaccac
cgaatggacgagttctcccgcgggaacgtgccttcgagcgagctgcagatctacacctgg
atggatgcaaccttgaaagaactgactagtttagtaaaggaagtctacccagaagccaga
aagaagggcacgcacttcaattttgcaattgtttttatggatcttaaaagacctggatat
cgagttaaagagattggcagcaccatgtctggcaggaagggcactgatgactccatgacc
ctgcagtcacagaagttccaaataggggattatttggacatagccatcacgcctccaaat
cgggcaccaccttcgtcagggaggatgagaccgtactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (3)   
   RefSeq(pep) (1)   
DNA sequence (17)   
   RefSeq(nuc) (1)   
   GenBank (8)   
   EMBL (8)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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