KEGG   Rattus norvegicus (rat): 290403
Entry
290403            CDS       T01003                                 
Symbol
Rubcnl
Name
(RefSeq) protein associated with UVRAG as autophagy enhancer isoform X1
  KO
K25948  protein associated with UVRAG as autophagy enhancer
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    290403 (Rubcnl)
Membrane trafficking [BR:rno04131]
 Autophagy
  Other autophagy associated proteins
   Others
    290403 (Rubcnl)
SSDB
Motif
Pfam: RH_dom RUBC_PIKBD zf-RRN7
Other DBs
NCBI-GeneID: 290403
NCBI-ProteinID: XP_008769127
RGD: 1304929
Ensembl: ENSRNOG00000022760
UniProt: D4A680
Position
15:56741897..56807086
AA seq 681 aa
MNSRITPSGTTAIGELSFEHVHSTPGKMVSQSTGQQDYPMDSCERTSHAFQDADGLPSVL
DTDQPACQLDVRLVRHKASWINPLCVQQPLRESGLQRPTAQNSENHVVVDTPSPSDLSIL
PQRDSLAEMSLSENTADVICNSSAYCSWGEKGDFFLATEEQEAHPQQKSLLKNPKAVATS
PFSKASVHSESPHLTASTDDGDAQSSRSHSWNFFPLETFILPADMEKENVHFYAADLIIS
VIENLKCSLLSQQQPGSSGTEEASRSCGTGAEVTFHTHAKQEPDPSASSHTGCEGCAALQ
VSPVAEALSYCPVAIEACTLDLNKLVILELGKSNDLTEGCRGSYSSSESATCKSNLSLAG
LLARELFRGFYKYWMLSEEVTRQPPGSLIPASSGVGEEEQAEEELDSSVDTAREVMLKSR
VPGTEDWVPPPCQIILTVHPPVKRDIAVVAQNFFCAGCGTPIQPKFVKRLRYCEYLGKYF
CDRCHSSAESCIPARILLMWDFRKYQVSDFSKWLLDSIWHQPIFNLLSGHHSLYAKVKEL
DRVKDIQEQLFHIKKLLKTCRFADSVLKEFEQVPSHLTDECHMFSMDDFLRTKKGLLAPL
LKDILRASLAHVDSCELCQGKGFICEFCQSTTVIFPFQTMTCRRCAGCRACFHKQCFQSS
RCPRCARIIARRQHSESLTGT
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgaattcaaggatcacacccagtggtacaacggccattggagaactgagttttgagcac
gttcactccacacctggaaagatggtgtcccaatccacaggccagcaagactatcctatg
gactcctgtgaaaggaccagccatgcctttcaggacgctgatggcttgcccagtgtcctg
gacactgaccaacctgcttgccagttagatgtgagactcgtaagacacaaagcttcctgg
atcaacccactgtgtgtgcagcagccacttcgagaatcaggcctccaaagaccaacggcg
cagaacagtgagaaccacgtggtcgtggacactccctctccctcggacctttcgatattg
ccccagagggactccctggctgagatgtcattgtctgagaatactgctgatgtcatctgc
aacagctctgcttattgctcctggggagagaagggtgacttcttcctggctacagaagag
caagaggctcatcctcagcagaagtctctgctcaaaaaccccaaggctgtggccacttcc
ccattctctaaggccagtgtccattctgagtctcctcatttgacagcttctacggatgat
ggtgatgctcagagcagcaggagccattcttggaatttcttcccactggagacattcatt
ctgcctgctgacatggaaaaggaaaacgtccacttttatgctgcagacttgatcatctca
gtaatagagaatttgaagtgcagtcttctgagtcaacagcagccagggagttcgggcaca
gaagaggccagcaggtcatgtgggactggagcagaagtgacctttcatacccatgcaaag
caggagccagacccctccgcttcttcacacactggctgtgaaggttgcgctgcactccag
gtcagcccagtggctgaggcactttcttactgtcctgtggcgatagaggcctgcacactt
gacttgaacaaattggtcatattagaacttgggaaatccaatgacctcacggaaggctgc
agaggctcctatagctcttcagagagtgcaacttgcaagtcgaatctcagtcttgctggg
ctcttagccagagagttgttccgagggttctataagtactggatgctgtcagaagaagtc
actcgtcagcctccaggctccctgatccccgctagctcaggagttggggaagaagaacaa
gctgaggaagagcttgactccagtgtggatacagcacgggaagtcatgcttaagtccagg
gtcccagggactgaagactgggtgccccctccatgccaaatcatacttactgttcacccg
ccagtcaagagggacatagcagtcgtggcccagaatttcttctgtgctggatgtgggact
cccatacaacccaagtttgtgaagcggctccgatactgtgagtacctcgggaagtacttc
tgtgacagatgccactcatctgcagagtcctgtatccctgctcggatcctgctgatgtgg
gacttcaggaagtaccaagtcagcgatttctctaaatggctactggacagcatatggcat
cagcccatcttcaacctgttaagtgggcatcacagcctctatgcaaaagtcaaggaactg
gatagggtgaaggacatccaggagcaactttttcatatcaagaagctgttgaagacttgc
aggtttgctgacagtgtgctgaaggagtttgaacaggttcccagtcatttgactgatgaa
tgccacatgttctccatggacgacttcctcaggaccaagaaaggactgttggcacctttg
ctcaaggacatcctgagagcttctcttgcccacgtggacagctgtgagctgtgccaggga
aagggcttcatttgtgagttttgccagagcacgactgtcatcttcccatttcagaccatg
acttgtagaagatgtgcagggtgcagggcctgcttccacaaacagtgcttccagtcttcc
agatgccctcgctgtgccaggatcatagcccggagacaacattcggagagcttaacagga
acatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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