KEGG   Rattus norvegicus (rat): 290458
Entry
290458            CDS       T01003                                 
Symbol
Trim52
Name
(RefSeq) tripartite motif-containing 52
  KO
K12025  tripartite motif-containing protein 52
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    290458 (Trim52)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    290458 (Trim52)
SSDB
Motif
Pfam: zf-C3HC4_4 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 zf-RING_5 zf-RING_10 zf-RING_6 Sina_RING TRAF6_Z2 DUF2457 TRAF3_RING DUF2512
Other DBs
NCBI-GeneID: 290458
NCBI-ProteinID: NP_001099526
RGD: 1565615
Ensembl: ENSRNOG00000024509
UniProt: D3ZJ28 A6HUC5
Position
15:89300495..89324140
AA seq 235 aa
MAAPTGPPSPMQSLREEAVCAICLDYFKDPVSIGCGHNFCRGCVTQLWGKEDEQDREPPA
VGNHVIREVLFHRYTEQEVFQHRAHAGRWAAHSHRRHRGNADSVWDDEEEDWNSLQGLVH
DLRIRVFPEERDEHPHDGHQYHHYGRYRHRPVFRRGPPHPPVRRQLYPDARPRSPPRVRS
PPRVHSPPRVRSPPRPTSQVFSCPQCRRTFPSRSFRPNLQLANMVHIIRQICHTP
NT seq 708 nt   +upstreamnt  +downstreamnt
atggccgcccctacagggcctcccagccctatgcagtcacttcgggaagaagcagtatgt
gccatctgtctggattactttaaggaccccgtgtccattggctgtgggcacaacttctgc
cgagggtgtgtgacccagctgtggggcaaggaagatgaacaggaccgggaaccgcctgct
gtagggaaccacgtcattagagaggttttgtttcataggtacacagaacaggaggtgttt
cagcaccgagcacatgctggacgctgggctgctcatagccatagaaggcatcggggcaat
gcagactctgtgtgggatgatgaggaagaagactggaacagtttacaaggactggtacat
gacctgagaattagggtttttccagaagaaagagatgaacacccccacgatggccaccaa
taccatcactatggccgataccgacaccgtccagttttccgccgtggtcccccacatcca
cctgtgcgtcggcagctctatccagatgcccgaccacgatctccacctcgagtacgatct
ccacctcgagtacattctccacctcgagtacgttctccacctcgtcccacatcacaggtc
ttcagctgcccacaatgccgaaggacatttccaagtcgcagttttcgacccaatttgcag
ctggccaacatggtccatataattcgccagatttgccatacgccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (13)   
   RefSeq(nuc) (13)   
Protein domain (14)   
   Pfam (14)   
All databases (42)   

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