KEGG   Rattus norvegicus (rat): 290519
Entry
290519            CDS       T01003                                 
Symbol
Thoc3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  Nucleocytoplasmic transport
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    290519 (Thoc3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    290519 (Thoc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    290519 (Thoc3)
   03041 Spliceosome [BR:rno03041]
    290519 (Thoc3)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     290519 (Thoc3)
Spliceosome [BR:rno03041]
 Complex C
  Other components
   EJC/TREX
    290519 (Thoc3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    290519 (Thoc3)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A RMC1_N NBCH_WD40 PD40 Coatomer_WDAD Nup160 Peptidase_S9_N Cytochrom_D1 DPPIV_N IKI3 DUF359
Other DBs
NCBI-GeneID: 290519
NCBI-ProteinID: NP_001099529
RGD: 1311669
Ensembl: ENSRNOG00000000104
UniProt: A6KB01 F7EUM8
Position
17:10148281..10157472
AA seq 351 aa
MAVPAAVLGPSALSQSGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFPAHSAKVHS
VAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASG
DKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ
FKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFA
TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDK
LWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggcggttcccgccgctgtcctggggccctctgccctcagccagagcggccccgggtcg
atggcgccctggtgctcggtgagcagtggcccgtctcgttatgtgctcgggatgcaggag
ttgttccgaggccacagcaagactcgtgagttcccggcgcacagtgccaaggtgcactcg
gtggcctggagctgcgacggtcgtcgcttggcctcgggatctttcgacaagactgccagc
gtgttcttgctggagaaggaccggctggtcaaggaaaacaactaccgtggacatggggat
agcgtggaccagctctgctggcatccaagcaaccctgacctttttgtcaccgcatctgga
gataaaaccattcgcatctgggatgtgaggactacaaaatgcatcgccactgtgaacacg
aaaggggagaacattaacatctgctggagtcccgacgggcagaccattgcagtgggcaac
aaggatgatgtcgtgacctttattgacgccaagacgcaccgttccaaagcggaggagcag
ttcaagtttgaggtcaatgagatctcgtggaacaacgacaacaacatgttcttcctgacc
aatggcaacggctgtatcaacatcctcagctacccagaactgaagcctgtgcagtccatc
aatgcccacccttctaactgcatctgtatcaagtttgaccccatggggaaatactttgcc
acaggaagtgcggatgccttggtcagcctctgggacgttgacgagctagtgtgcgtgcgg
tgcttttccagactagattggcctgtgaggaccctcagttttagccacgatgggaaaatg
ctggcgtcggcttcggaggaccatttcattgacatagctgaagtagagacaggagacaag
ctgtgggaggtgcagtgtgagtccccgactttcaccgtggcttggcaccccaagaggcct
ctgctggcttttgcctgcgacgacaaagatggcaagtacgacagcagccgggaggctggg
accgtgaagctcttcgggcttcccaatgactcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (31)   

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