KEGG   Rattus norvegicus (rat): 290551
Entry
290551            CDS       T01003                                 
Symbol
Chdh
Name
(RefSeq) choline dehydrogenase, mitochondrial
  KO
K00108  choline dehydrogenase [EC:1.1.99.1]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00260  Glycine, serine and threonine metabolism
rno01100  Metabolic pathways
Module
rno_M00555  Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    290551 (Chdh)
Enzymes [BR:rno01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.99  With unknown physiological acceptors
    1.1.99.1  choline dehydrogenase
     290551 (Chdh)
SSDB
Motif
Pfam: GMC_oxred_N GMC_oxred_C Lycopene_cycl NAD_binding_8 FAD_binding_2 DAO Nif11 Pyr_redox_2 Thi4 ApbA HI0933_like
Other DBs
NCBI-GeneID: 290551
NCBI-ProteinID: NP_942026
RGD: 735166
Ensembl: ENSRNOG00000015859
UniProt: Q6UPE0
Position
16:5199738..5232067
AA seq 599 aa
MWQVLRSWSKRCLSPRGALAWAAQGQPRPPCSCAVASAASGGKDEYTFIVVGAGSAGCVL
ANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVANLCDDKYNWYYHTEAQPGL
DGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQGAEGWDYAHCLPYFRKAQKHEL
GANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEGFGWMDMTIHQG
KRWSTASAYLRPALSRPNLRAEVQTLVSRVLFEGTRAVGVEYIKDGQSHKAYVSREVILS
GGAINSPQLLMLSGVGNADDLKKLGIPVVCHLPGVGQNLQDHLEIYIQHACTQPITLHSA
QKPLRKVCIGLEWLWRFTGDGATAHLETGGFIRSRPGVPHPDIQFHFLPSQVIDHGRKPT
QQEAYQVHVGTMRATSVGWLKLRSTNPQDHPMINPNYLSTETDVEDFRQCVKLTREIFAQ
EAFAPFRGKELQPGSHVQSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDQQTRVI
GVENLRVIDASIMPSVVSGNLNAPTIMIAEKAADVIKGCPALGDENVPVYKPQTLDTQR
NT seq 1800 nt   +upstreamnt  +downstreamnt
atgtggcaggtccttagaagctggagcaaaagatgtctgagcccacgtggagccctggct
tgggctgcgcagggccagccacgtcccccctgcagctgcgctgttgctagcgccgcctct
gggggcaaggatgagtacaccttcatcgtggtgggcgcaggctctgctggctgcgtgctg
gccaatcggctcactgaggacccgaatcatcgggtactgctactggaggcggggcccaag
gacttgttgatggggagcaagcggcttcagtggaagatccacatgccagctgcccttgtg
gccaacttgtgcgacgacaaatacaactggtactatcacactgaggctcagcccggccta
gatggccgggtactgtactggccacgaggccgggtctgggggggttcctcctccctcaat
gccatggtctacatccgaggtcatgcggaggactataaccgctggcaccgccaaggtgct
gagggctgggactatgcacactgcctgccctacttccgcaaggcacagaaacatgagcta
ggtgccaatatgtaccgtggtggggatggcccactgcatgtgtctcggggcaaaaccaac
cacccactccaccaggccttcctgcaggcagcacgtcaggctggctaccccttcactgaa
gacatgaatggcttccaacaggagggcttcggctggatggacatgaccatccaccaaggg
aagcgctggagcacggccagtgcctacttgcgcccagcgctgagccgccccaacctcagg
gccgaggtccagacacttgtaagcagagtgctgtttgagggcacgcgagcagtgggcgtg
gagtacatcaaggacggccagagccacaaggcttacgtcagcagggaggtgatcctgagc
gggggcgccatcaactctccacagctgctcatgctctctggtgttgggaatgcagatgac
ctcaagaaactgggcatccctgtggtgtgccatctgcccggagttggtcagaacctgcag
gaccacctggagatctacattcagcatgcttgcacacagcccatcaccctccactctgcc
cagaagcctctgcggaaggtctgcatcggcctggagtggctctggaggttcacaggagat
ggagccacagcccatctagagaccggagggttcatccgcagccggcctggggtcccccat
ccggacatccagttccacttcctgccatcacaagtgattgaccatgggcggaaacctacc
cagcaggaggcctaccaggtacatgtgggaaccatgagggccacaagtgtgggctggctg
aaactgagaagcaccaaccctcaggaccacccaatgatcaatcccaactacctgtcaaca
gaaaccgatgtcgaggacttccgtcagtgtgtgaagctgacacgggaaatttttgcacag
gaagccttcgctccctttcggggcaaagagctgcagccgggaagccatgtccagtcagac
aaagagatagatgcctttgtgcgggcaaaagcagacagtgcataccatccctcctgtacc
tgtaagatgggccagccctctgaccccactgctgtggttgatcagcaaaccagggtcatc
ggggtagaaaacctcagagtcattgatgcctccatcatgcccagtgtggtcagtggcaac
ctgaacgctcccacgatcatgattgcagagaaagcagctgacgttattaagggatgccct
gcactcggggacgagaatgttcctgtctacaagccccagactctggacacccagcgttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (12)   
   RefSeq(nuc) (6)   
   GenBank (3)   
   EMBL (3)   
Protein domain (11)   
   Pfam (11)   
All databases (49)   

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