KEGG   Rattus norvegicus (rat): 290561
Entry
290561            CDS       T01003                                 
Symbol
Tnnc1
Name
(RefSeq) troponin C, slow skeletal and cardiac muscles
  KO
K05865  troponin C, slow skeletal and cardiac muscles
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04020  Calcium signaling pathway
rno04260  Cardiac muscle contraction
rno04261  Adrenergic signaling in cardiomyocytes
rno04814  Motor proteins
rno04820  Cytoskeleton in muscle cells
rno05410  Hypertrophic cardiomyopathy
rno05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    290561 (Tnnc1)
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    290561 (Tnnc1)
   04820 Cytoskeleton in muscle cells
    290561 (Tnnc1)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    290561 (Tnnc1)
   04261 Adrenergic signaling in cardiomyocytes
    290561 (Tnnc1)
 09160 Human Diseases
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    290561 (Tnnc1)
   05414 Dilated cardiomyopathy
    290561 (Tnnc1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    290561 (Tnnc1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Troponins
     290561 (Tnnc1)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_8 EF-hand_6 EF-hand_5 EF-hand_9 AIF-1 EF-hand_4 SPARC_Ca_bdg DUF5580_M DUF6694
Other DBs
NCBI-GeneID: 290561
NCBI-ProteinID: NP_001029277
RGD: 1309921
Ensembl: ENSRNOG00000018943
UniProt: Q4PP99
Position
16:6408607..6412070
AA seq 161 aa
MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM
IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKMM
LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE
NT seq 486 nt   +upstreamnt  +downstreamnt
atggatgacatctacaaagcagcggtagagcagttgacagaagaacagaagaatgagttc
aaggctgccttcgatatctttgtcctgggcgcggaggatggctgcatcagcaccaaggag
ctgggcaaggtgatgaggatgctgggacagaaccccacacctgaggagctgcaggagatg
atcgacgaggtagacgaggatggcagtggcacagtggacttcgacgagttccttgtcatg
atggttcggtgcatgaaggatgacagcaaagggaagtctgaggaggagctgtcggatctc
ttccgcatgtttgacaaaaacgctgatggctacattgacttggatgaactgaagatgatg
ctgcaggccacaggtgagaccatcacggaagatgacatcgaagagctcatgaaggacggt
gacaagaacaacgatggccgaatcgactatgacgagttcctggagttcatgaagggcgtg
gagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (12)   
   RefSeq(nuc) (2)   
   GenBank (5)   
   EMBL (5)   
Protein domain (11)   
   Pfam (11)   
All databases (42)   

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