KEGG   Rattus norvegicus (rat): 290627
Entry
290627            CDS       T01003                                 
Symbol
Use1
Name
(RefSeq) vesicle transport protein USE1
  KO
K08507  unconventional SNARE in the endoplasmic reticulum protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    290627 (Use1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    290627 (Use1)
Membrane trafficking [BR:rno04131]
 SNARE
  SNAP-25[C] (Qc)
   Use1
    290627 (Use1)
SSDB
Motif
Pfam: Use1 EssA MCU CCB2_CCB4 Prominin Adhes-Ig_like
Other DBs
NCBI-GeneID: 290627
NCBI-ProteinID: NP_001162571
RGD: 1306660
Ensembl: ENSRNOG00000016619
UniProt: B0BNG6
Position
16:18069118..18075816
AA seq 270 aa
MAQAEGACHRPLATSRLELNLVRLLCRCESMAAEKREPDEWRLEKYVGALEDMLQALKVQ
ASKPASEVISEYSRKVDFLKGMLQAEKLTSSSEKALANQFLAPGRVPTTAKERVPATKTV
HLQSRARYTSEMRSELLGTESSGELEADMRKRVVKGPRPADEKQSASELDLVLQRHQGLQ
EKLAEEMLGLARSLKTNTLAAQSVIKKDNQTLSHSLKMADQNLEKLKLESERLEQHAQKS
VNWLLWAMLIVVCFVFISMILFIRIMPRLK
NT seq 813 nt   +upstreamnt  +downstreamnt
atggcgcaggcggaaggggcctgtcaccgtccgctggcgacgtcgcggctggagttgaac
ctggtgcggctgctttgtcgctgtgagtcgatggcggccgaaaaacgagaaccggacgag
tggcgtctggagaagtatgtgggtgccctggaagacatgctgcaggccctgaaagtccaa
gcaagtaaaccggcctcggaagtgatcagtgagtactcccgcaaagtggactttctgaag
ggcatgctgcaggctgagaagttgacctcctcctctgaaaaggctctagctaaccagttc
ctggctcctggccgcgtgcccaccacagccaaggagcgggtgcctgccaccaagactgta
catttgcagtctagagcacgttacaccagtgagatgcggagtgagctgttgggcacggag
tcctctggagagctggaggcagacatgaggaagcgagttgtgaaggggcctagacctgca
gatgagaagcagtcagcgtccgagctagacctcgtcctccagaggcaccagggcctccag
gaaaagctggctgaggagatgctaggcttggcccgcagcctgaagaccaacacactggct
gcccagagtgtcatcaagaaggacaaccagaccctgtcacattcgctcaagatggcagac
cagaacctggagaagctgaagctggagtcagagcggctggagcagcacgcacagaagtcg
gtgaactggctgctgtgggccatgctcatcgtcgtgtgcttcgtgttcatcagcatgatc
ctgttcatacgcatcatgcccagactgaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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