KEGG   Rattus norvegicus (rat): 290633
Entry
290633            CDS       T01003                                 
Symbol
Gtpbp3
Name
(RefSeq) tRNA modification GTPase GTPBP3, mitochondrial precursor
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    290633 (Gtpbp3)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    290633 (Gtpbp3)
 Prokaryotic type
   Methyltransferases
    290633 (Gtpbp3)
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 Dynamin_N FeoB_N RsgA_GTPase AAA_16 DO-GTPase2 SRPRB AAA_28 MMR_HSR1_Xtn PEP-utilisers_N
Other DBs
NCBI-GeneID: 290633
NCBI-ProteinID: NP_001011919
RGD: 1305367
Ensembl: ENSRNOG00000023403
UniProt: Q5PQQ1
Position
16:18209747..18214838
AA seq 492 aa
MWRGLSALVTRPASAPLRLCARCSTGAESLVPGSTIFALSSGQGRCAIAVIRTSGPASGL
ALRSLTALREPPPARSACLRLLRHPCSGEPLDRSLVLWFPGPQSFTGEDCMELHVHGGPA
VVSGVLQALGSVPGLRPAKAGEFTRRAFAHGKLSLTEVEGLADLIHAETEAQRRQALRQL
DGELSQLCQGWAKTLTKALAHVEAYIDFGEDDNLEEGVLEQVDRDVRALEVALSSHLRDA
RRGQRLRSGANVVVAGPPNAGKSSLVNLLSQKPVSIVSPEPGTTRDILETPVDLAGFPVL
LSDTAGLREGAGAVEQEGVRRARQRLEQADIILGMLDASDLASSSSCSFLDTVVAPLVAQ
SHDSGRQRLLLLLNKSDLLSANAPASSTALPPHLLLSCHTGAGMDALLQALKTELAAVCG
DPSTGPPLLTRARHQYHLQGCLDALGRFQLTTDLALAAEALRQARRQLSHLTGGGGTEEI
LDLIFQDFCVGK
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtggcgtgggctaagcgccctggtgacccggccggcaagtgcgcccctcaggctgtgc
gcacgctgcagcaccggtgcagagtccttggtccccgggagcaccatctttgcgctcagc
tccggccagggacgctgcgccatcgcagtgatccgcaccagcggcccagccagtgggctc
gcgctccgcagcctcacggctctccgggagccgcctccggcccgcagcgcctgcttgcgc
cttctccgccacccttgctccggggagccactggaccgctcactcgtcctctggtttcca
ggcccccagagtttcacgggtgaggattgcatggagttgcacgtacacggaggtcctgcg
gtggtcagcggtgtcctgcaggcattgggtagtgtgccaggacttcgcccagccaaggcc
ggggagttcaccaggagggcctttgcccatggcaaactgagcctgactgaagtggaggga
cttgcggatctgatccatgcagaaacagaggcccagcgtcgacaggccttgaggcagctg
gatggggaactgagccagctgtgccagggctgggcgaagaccctcaccaaggctctggcc
catgtggaggcctacattgacttcggagaggatgataatttggaagagggtgtgttggag
caggtggacagagatgtgcgggccctggaggtggcactgagttcccacctgcgagatgcc
agacgtggacagaggctccgctcaggggcaaacgttgtggtcgccggaccgcccaatgcg
ggcaagagcagtctagtgaatctgctcagccagaagccagtgtccattgtgtccccagag
cccgggaccacccgtgacatcttggagactcctgtggacctggctgggtttcctgtcttg
ttgagcgacaccgcggggcttcgggaaggtgcaggtgctgttgagcaggagggagtgcgc
agggcccgccagaggctggagcaagctgacatcatcctggggatgctggatgcctccgac
ctggcttcctcctctagctgcagcttcctggacactgtggtggccccactggtagcacaa
agccatgacagtggcaggcagcgcctcctgctgctgctcaacaaatctgatctgctgtct
gctaatgccccagccagcagcacagccctgcctcctcacctgcttctgtcctgccacact
ggagctgggatggacgccctcctgcaggccctgaagactgaactggctgcagtgtgtggg
gacccatccacaggaccgccgctcttgacccgagctaggcaccagtaccacctccagggc
tgcctggatgccctgggccgcttccagctgaccacagatctggctctggccgccgaggcc
ctgcgccaggctcggagacagctaagccacctcacaggtggagggggaaccgaggagatc
ctggacctcatcttccaggacttctgtgtgggcaagtga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (36)   

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