KEGG   Rattus norvegicus (rat): 290660
Entry
290660            CDS       T01003                                 
Symbol
Ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
  KO
K14778  ATP-dependent RNA helicase DDX49/DBP8 [EC:3.6.4.13]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    290660 (Ddx49)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  90S particles
   Helicases
    290660 (Ddx49)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA AAA_22 SNF2-rel_dom
Other DBs
NCBI-GeneID: 290660
NCBI-ProteinID: NP_001108495
RGD: 1311124
Ensembl: ENSRNOG00000022368
UniProt: B0BNK0
Position
16:19159353..19167003
AA seq 480 aa
MAGFAELRLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI
LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALELSRK
PHVVIATPGRLADHLRSSNTFNMKKIRFLVLDEADRLLEQGCTDFTADLETILSAVPARR
QTLLFSATLTDTLKELQGLATNQPFFWEAQATVRMVEQLDQRYLLVPEKVKDAYLVHLVQ
TFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALARFKSSTYR
ILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLL
HAIEEEIKQQLAELAVEEAQVLQILTQVNVVRRECEIKLEASHFDEKKEINKRKQMILEG
KDPDLEAKRKAELAKIKQQNRRFKEKVEQTLRQQKAGSTGRRSRPPRPRPQEPARAEAQN
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggcggggttcgctgagctccggctatcgtcgtggctggtggaacagtgtcgacagctg
gggttgaagcagcccacgccggtgcagctcgggtgcatcccggccatcctggaaggtcgg
gactgcttgggttgtgcaaaaacaggaagtggcaagacagcagcctttgtacttcccatc
ctgcagaagctgtctgaggacccttatggcatcttctgcctggttttgacacccactaga
gagctggcctaccagatagctgagcagttccgagtgctggggaagcctctgggcctaaag
gactgcatcatcgttggtggcatggacatggtgacgcaggccctggagctctctcggaag
ccacacgtggttattgccacccctgggcgcctggctgaccacctgcgcagttccaacact
ttcaacatgaagaaaatcagattcttggtgttggacgaggccgataggctgctggagcag
ggttgcaccgacttcactgcagacctggagaccatcctgtcagctgttccagcacgcagg
caaaccctcctgttcagtgccacactgacggacacactcaaggagctgcagggcctggct
accaaccagcccttcttttgggaggcacaggccacggttcgcatggtggagcagcttgac
cagcgctatctgctggtgcctgagaaggtgaaggacgcctacctggttcacctggtccag
accttccaggaccagctggaggactgctccatcatcatcttcaccaatacctgcaagacc
tgccagatcctttgtatgatgcttcgaaagttcaacttccccacagtggcactgcactcc
atgatgaagcagaaagagcgctttgcagccctggccagattcaagtccagcacctatcgg
attcttattgctactgacgtggcctccagaggcctggacatccccactgtgcaggtggtc
atcaaccacaacacccctgggctccccaagatctacatccatagggtcggtcgcacagcc
cgtgcagggaggcagggacaggccatcacactggtgacgcagtacgacatccacctgttg
catgccatcgaggaggagatcaaacagcagctggctgaattggcagtggaggaggcccag
gtcctgcagatcctcacacaggtcaacgtggtgcgcagggagtgtgaaatcaaactggag
gcttcgcattttgatgaaaagaaggagatcaacaagcggaaacagatgatcctggagggg
aaggacccggacctggaggccaagcgcaaagctgagctggccaagattaagcaacagaac
cggcgcttcaaggagaaagtggagcagacgcttcggcagcagaaagcagggagcacaggc
cggcggtcgcgtcctcccagacctcgtccccaagagccagccagggctgaggctcagaac
tga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

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