KEGG   Rattus norvegicus (rat): 290729
Entry
290729            CDS       T01003                                 
Symbol
Neil3
Name
(RefSeq) endonuclease 8-like 3
  KO
K10569  endonuclease VIII-like 3 [EC:3.2.2.- 4.2.99.18]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    290729 (Neil3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    290729 (Neil3)
Enzymes [BR:rno01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     290729 (Neil3)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     290729 (Neil3)
SSDB
Motif
Pfam: zf-GRF H2TH zf-RanBP Fapy_DNA_glyco zf-FPG_IleRS zinc_ribbon_2
Other DBs
NCBI-GeneID: 290729
NCBI-ProteinID: NP_001163817
RGD: 1310562
Ensembl: ENSRNOG00000011688
Position
16:45091401..45151419
AA seq 606 aa
MVEGPGCTLNGEKIRARVLPGQAMTGVRGTALQGLLGSALSPAASLAEVTSSAAPMNAKD
SGWKVLRLFNGCVYSGVETLGKELFMYFGPRALRIHFGMKGSILINPPKCENRGGVSPAF
EVQLTNDLICFFDSSVKLRNSVESQQRVRMMEGLDVCSPKFSLSRAESEVKKQRDRMLCD
VLLDQRVLPGVGNIIKNEALFDSGLHPTVKVCQLSDKQAHHLVKMTRDFSILFYRCRKAG
SAISKHYKVYKRPNCAQCHCKIRVCRLGENSRMTYFCPHCQKENPQHVQICSLPFRNAEI
SWTPKGQDCFTDSVARKSEEQWSCMVCTLINKPSATACDACLTTRPVDSVLKNEENSIAF
SNLVKYPFNNFENTHTEIKINRKTVFGNTTLVLTDLSNKSSALARKSSPSQTIDGESQIF
LPTDICFSDPQHISKEGVNYITQPSNKVNMSSTVGAQSKLFTSAHKKLKTAHSLATELKS
YNSGLSNSELQTNIRSDPCSLHASRPQCKTHSRPCVLRVVRKDGENKGRQFYACSLPRGA
QCGFFEWADLSFPFCGHGKRSIMKTVLKIGPNNGKNFFVCPLEKEKQCNFFQWAESGPEM
EIIPGC
NT seq 1821 nt   +upstreamnt  +downstreamnt
atggtggaagggccaggatgtacactgaatggagagaagattcgggcacgagtgctaccg
ggacaggcgatgactggtgtgcggggaacagctctgcagggcctcttgggctctgccttg
tcccccgcagcctccctggctgaggtcactagctcggctgctccaatgaacgctaaagat
tctggctggaaagtcttgagactgtttaatggatgtgtttacagtggtgtggaaaccttg
gggaaggagctgtttatgtactttggcccaagagctttacggattcatttcggaatgaaa
ggctccatcttgattaacccgcctaagtgtgaaaatagaggtggagtttctccagctttt
gaagtgcagctcaccaatgacttgatctgtttctttgactcttcagtaaaactcagaaat
tcagtggaaagccaacaaagagtcagaatgatggaaggattggatgtatgctcaccaaag
ttcagtctctcaagagcagaaagtgaagttaagaagcagagagatcggatgctgtgtgat
gtgttactggatcagagggtgttgcctggtgtagggaacatcatcaaaaatgaagctctc
tttgacagtggactccatccaactgttaaggtgtgtcaactatcagacaaacaggcccat
caccttgtgaagatgacccgggatttcagcattctcttctacaggtgccgtaaagcagga
tctgccatttctaaacactataaggtttataagcgtcctaactgtgcacagtgccactgc
aaaattagagtgtgtcgcttaggggagaacagcaggatgacgtatttctgtcctcactgt
cagaaagaaaaccctcaacatgttcaaatatgctcactgcctttcagaaatgctgaaatc
agctggactcctaaaggacaggattgctttaccgactcagtagctcggaagtctgaagag
cagtggtcctgcatggtttgcaccctcataaacaaaccctcggctacggcctgcgatgct
tgcctgacgacaaggcctgtggattcagtgctcaaaaatgaagagaattccattgccttt
agcaacttagtgaagtacccttttaataactttgagaacacacacactgaaataaagatc
aacaggaaaactgtgtttggaaatacaacccttgttttgactgatttgagcaacaaatct
agtgctttggccagaaaaagcagcccaagccagacaatagatggggaatctcaaattttt
cttcctacagacatatgtttcagtgatccacagcacatctccaaagaaggagtaaactat
ataactcaaccatccaacaaggtaaacatgtcgtccacagttggtgcccagtctaaatta
tttacttcagcacataaaaaattgaaaacagctcactctttggcaacagaacttaaaagt
tacaactctggactttctaacagtgaactccaaaccaatataagaagtgatccttgttct
ctacatgccagcaggcctcagtgcaagacgcacagccggccctgtgttctccgagttgtg
aggaaggatggagaaaacaaaggaaggcagttttatgcatgttctctgcccagaggagca
cagtgcggattttttgaatgggcagacctgtccttcccgttctgcggacatggcaagcgc
tccattatgaaaactgtgttgaagattggacctaataatgggaagaatttttttgtatgt
cctttggagaaagaaaagcagtgtaattttttccagtgggcagaaagtggaccagaaatg
gaaattattccaggatgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

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