KEGG   Rattus norvegicus (rat): 290851
Entry
290851            CDS       T01003                                 
Symbol
Vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
  KO
K12190  ESCRT-II complex subunit VPS36
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    290851 (Vps36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    290851 (Vps36)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    290851 (Vps36)
Membrane trafficking [BR:rno04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    290851 (Vps36)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   290851 (Vps36)
  Exosomal proteins of colorectal cancer cells
   290851 (Vps36)
SSDB
Motif
Pfam: EAP30 Vps36_ESCRT-II GRAM MA3 BBL5 PH_TFIIH Xre-like-HTH
Other DBs
NCBI-GeneID: 290851
NCBI-ProteinID: NP_001099562
RGD: 1309754
Ensembl: ENSRNOG00000012654
UniProt: B1H248
Position
16:complement(76512851..76537235)
AA seq 386 aa
MDRFVWTSGLLEINETLVIQQRGVRVYDGEEKIKFDAGTLLLSTHRLIWRDQKNNECCMA
IPLSQIVFIEEQAAGIGKSAKIVVHLHPAPPNKEPGPFQSSKNSYIKLSFKEHGQIEFYR
RLSEEMTQRRWETVPVSQSLQTKKGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMIKAKEMVELSKSIANKIKEKQGDVTEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEGLKLP
VRLRVFDSGVMVIELQTHKEEEMVASALETVSERGSLTSEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQN
NT seq 1161 nt   +upstreamnt  +downstreamnt
atggaccgcttcgtgtggaccagcggcctcctggagatcaacgagaccctggtgatccag
cagcgaggagtgcgcgtctacgacggcgaggagaagataaaatttgatgctgggactctt
ctccttagtacacaccggctgatttggagagaccagaaaaacaatgagtgctgcatggcc
attcccctatcgcagattgtgttcatcgaggagcaggcggctggaattgggaagagtgcc
aaaatcgtggttcatctgcacccagcccctcctaacaaagaacccggcccattccagagc
agtaagaactcctacatcaagctctccttcaaagagcatggtcagatcgagttttacagg
cgtttatcagaggagatgacccaaagaagatgggagacagtgccagtttcccagtcacta
caaacaaagaaaggaccccagccaggaagaataagagctgttggaattgtaggcattgaa
aggaaacttgaagaaaaaaggaaagaaacagacaaaaacatttctgaggcctttgaagac
ctgagcaagctgatgatcaaggctaaggaaatggtagagttatcaaaatcgatcgctaat
aagattaaagagaagcaaggcgatgtcacagaagacgagaccatcaggtttaagtcgtac
ttgctgagcatgggaatagccaacccagtcaccagagaaacctatggctcaggcacacag
taccacatgcaactggccaagcagctggccgggatattgcaggctcccttggaggagcgt
gggggaataatgtcactcacagaggtgtactgtttagtgaaccgagcccgaggaatggag
ttgctctcaccagaagacttagtaaatgcatgcaagatgctggaaggcctgaaactgcct
gtcagactccgggttttcgacagtggtgtcatggtaattgagcttcagactcacaaggaa
gaggaaatggtggcctcggccttagagacggtttccgagaggggatccttaacatcagaa
gagtttgccaagcttgtgggaatgtctgtccttctggctaaagaaaggctgcttcttgcg
gagaagatgggccacctttgccgagatgactctgtggaaggcttgcggttttatccaaat
ttatttatgacacagaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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