KEGG   Rattus norvegicus (rat): 290997
Entry
290997            CDS       T01003                                 
Symbol
Uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80
  KO
K20775  BRCA1-A complex subunit RAP80
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    290997 (Uimc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    290997 (Uimc1)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     290997 (Uimc1)
SSDB
Motif
Pfam: RAP80_UIM UIM XAF1_C Rad50_zn_hook UBZ_FAAP20
Other DBs
NCBI-GeneID: 290997
NCBI-ProteinID: NP_001013906
RGD: 1307009
Ensembl: ENSRNOG00000016891
UniProt: Q5PQK4
Position
17:9528923..9597967
AA seq 726 aa
MPRRKKKIKEASEGQNLEKKDLETTSSVSIKKKRRLEDLFIVISDSDGEETKEENGLQKM
KTKQSNRSKCLAKRKIAQMSEEEQFALALKMSEQEAKEVNNQEEKEEELLRKAIAESLNS
RWSSDASAARPRPLSTGPSSHPHQDSTKDSGTTEGIWQLAPPSLCKGSQISQGNEAEEGK
EPWDHSENPEEEPLSGSSGSQDQSSRPVFENEKVKCFDRCTGHLAEHTQCGKPQESTGSG
CAFPKAVQGRGDTSRQCLPTPADTKGLQDIGGTVHYYWGVPFCPAGVDPDQYTSVILCQL
EVYQKSLKMAQRQLVKKRGFGEPVLPRPPFLIQNECGQEEQTSEKHEGLSEDVRAGAREE
RQGSGASVWHSETKDSQKSPITSLKQRLLLEEEPTTGRGQSSQGLFVEETSEEVLKSSEG
DDAVPASQSIAVLTSKRDLVLMPEASTEEVTVCPETQLSSFEPLDLNGEDSVDGREIPTE
LGMTVSNRQVDNREAGKDSRPPAVSASARVSCPLCNQDFPPTKIEQHAMYCTGLMEPETV
LTRRRREAKKKSDGRTAAQPALDISRKEKCYLCKSLVPLGEYQCHVETCLQLANVDRENG
TEGMRRPRVCAPVEGKPKQRLRKSKEKGHSQGRLLSLLEQSEHRTTGVERTPKCSEAGAF
RMPSPDVEEAGCSRERQSSLSKLNLNESPIKSFVPVSEATNCLVDFKGQFAFRSQTKSGR
GRRRKS
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgccacgaagaaagaaaaaaattaaagaagcctccgaaggtcagaacctcgagaagaag
gatctggaaaccaccagttctgtcagtataaaaaagaagcgtcgactggaggacttattc
atagtgatatctgatagtgatggagaggaaacaaaagaggaaaatggattacagaaaatg
aagacaaaacagtcaaacagatcaaagtgtttggctaaaagaaaaattgcacagatgtca
gaagaagaacaatttgctttggctctcaaaatgagtgagcaggaagctaaggaggtgaac
aaccaggaggagaaagaagaagagctcttgaggaaagccattgctgaaagcctgaatagt
cgctggtcttctgacgcttctgctgccagaccccgacctctgtctactgggccgtcctca
catccccatcaagacagcaccaaagattctggaaccactgaaggcatatggcagctggca
cctccatcactgtgcaaaggctcacagatcagtcagggaaacgaggctgaggaaggaaag
gagccctgggaccacagtgaaaaccctgaagaggagccgctctctggcagctcaggaagc
caggaccagtcaagccggccagtgtttgagaatgagaaggttaaatgttttgacagatgt
actggccacttggctgagcacacacagtgtgggaagccacaggaaagtactgggagtggt
tgtgcttttcccaaagctgttcagggtaggggggacacgtctaggcaatgccttcctacc
ccagcagacaccaaaggcctccaggacattgggggcacagtgcactactactggggtgtt
ccattctgccctgctggagtagaccctgatcaatacaccagtgtcattctgtgccagttg
gaggtgtatcagaagagcttgaaaatggctcagagacagcttgttaaaaaaagagggttt
ggggaaccagtgttacctagacctccttttctgatccagaatgaatgtggccaagaagag
cagactagtgaaaagcatgaaggcctctcagaagatgtgagagctggagccagggaggaa
aggcagggctctggggcatctgtctggcactcagaaaccaaggattctcaaaaaagtccc
attacaagcttgaagcagagacttttgttggaggaagaaccaacaaccggtcgtggtcag
tcttcccaaggtctgtttgttgaagaaacttctgaagaagttctgaagagttctgaagga
gacgacgctgtgcctgcctcacaaagcattgcagttttgaccagtaagagagatttagtt
cttatgccggaagcttctacagaagaagtcactgtttgtcctgagacacagttaagttcc
tttgagccccttgacctgaatggagaagactctgtagatggcagagagatccccactgaa
ctaggaatgacagtgagtaataggcaggttgataatagggaagctggtaaggacagtcgt
cctcctgcagtctcggctagtgccagggtgtcctgcccactgtgtaaccaagacttccct
cccacaaagattgagcagcatgccatgtactgcactggcctgatggagccggaaacagta
ttgactcggagacgaagagaggccaagaaaaaaagtgatggtaggacagctgcgcagcct
gccctggacatcagcaggaaggagaagtgttatctgtgtaagtccctggttccacttggg
gagtatcagtgtcatgtagagacctgtctccagcttgcaaatgttgacagagaaaatggg
actgaagggatgaggagaccaagagtgtgtgcacctgtggaggggaaaccgaagcagcga
ctgaggaagtcaaaggaaaaaggtcatagtcaaggccgacttctcagtctcttggagcag
tctgagcacaggaccacaggtgtagagagaacccccaagtgttccgaagcaggagccttc
aggatgccctcaccagatgtggaagaggctggctgcagcagagagaggcagagttcgctc
tcaaagctcaacttaaatgagtctcccatcaagtcttttgttcctgtttcagaagctaca
aattgcttagtggactttaaaggccaatttgctttccggtcacaaaccaaatcaggcaga
ggaaggaggagaaaatcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (11)   
   RefSeq(nuc) (9)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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