KEGG   Rattus norvegicus (rat): 291002
Entry
291002            CDS       T01003                                 
Symbol
Cdhr2
Name
(RefSeq) cadherin-related family member 2 isoform X1
  KO
K16502  cadherin-related family member 2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    291002 (Cdhr2)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Cadherin related
   291002 (Cdhr2)
SSDB
Motif
Pfam: Cadherin Cadherin_4 Big_9 Cadherin_pro Tfb2 Shisa
Other DBs
NCBI-GeneID: 291002
NCBI-ProteinID: XP_038952440
RGD: 1560576
Ensembl: ENSRNOG00000017917
Position
17:complement(9881979..9917698)
AA seq 1162 aa
MEVPRAYTAWGYLHFWPTVIPSTDNSKDLFRILVNGSIVLNDTLSYNNKSAFYQLELKAC
DSGGLLNNTLVTQCSQPVFVSISVIDEPDLDPQFVREFYSASVSEDATLGTSVLAVEAVD
SDKGVNYNVTYNITNSTRPGWFCIEKDGVITVCGPLDREQLLLDNEEVQIQVTATEEKPN
IYQQEAKVSTWVTIKVTDVNDHKPEFYNCSLQNCTFSPQEAQDNFTGYVDEHASARISID
GLTMVAYDPDQGANGTFLLSLNGTDAEAFNVSPERAAVSVSVQVVVKNSEMVDYEKKTEM
QVQVVATDSVSGNYSVATVTIHLRNINDHRPVFSKSLYELTVPENSPTGFLVTDSIEATD
LDGDEWGPITYSLLPGAGEDLFEVEPKSGNVTVKNGTLLDREKQAMYYLTMQATDGGNQS
TTTMLQITLLDVNDNPPVVRGSYNIFVPEEDGDVSVTIQAYDDDQPGTNNSRLLFSLLPG
SYSQNFSIDPDTGLLRNLEPLDREAIDPALEGRIVLTVHVADCGEPSLSTDVNVTITVED
INDNLPIFNQSSYEFFVMERVPGALVGTVKAWDADQTAANNRISFSLSGTGANNFILQSI
VLALGWAEGHLWLLPDVSLDYETQKLFNLTVSAENPGPQGLESTANITVVVVDVNDEPPT
LDAVSLQSISVAENGSEHGQVAQVIAQDVDTNALLRIELVDVLCTKAGVDVGSVCHGWFS
VDTNGSVYINQSEAIDYEVCHLVTLVVRAQDLATDLGFDAYSSNGSLLINIKDKNDNTPY
FLPNNQTFVIIPELVLPNQQVASVQARDEDSEDNGIIKFSILKADFVPKDGATNPVQVFR
ISQSVEAGLYTGSIELVTNLDSTLQGTYQVTVQAQDQPAMDPALETQTTLNLFTVDQSYR
VRLQFSTSREDVGANMEEIKAALIQATRTSVYVVTIQNIDSMARARVNSYMDAYFVFSNG
SALTLTELNVMIRKDQDALRQLLQLGLVVVSSQETQEFNQTQLLTNVIIGLVVSLVLVLV
IMITALVCFRKSYHRKLRAMKAGKEARKTPIETMTPAAAIPGTNVYNTDRANPMLDLPTK
DLGLECHSSSDLDYHSLNSLDENSVDLDTDSKEFKRKDLPHNPPESDSEPLTAALSGRSA
GTSGQQQRELSFTNPGLDTTDL
NT seq 3489 nt   +upstreamnt  +downstreamnt
atggaggttccaagagcttacactgcttggggatatttgcacttctggccaacggtcatc
cccagcacggacaacagcaaagatctcttccgcatcctggtaaacggctccattgtgctg
aatgacactctcagctacaacaacaaaagcgccttctaccagctggagctgaaggcctgt
gactccggaggattgttgaataacaccctagtcacccagtgctcccagcccgtctttgtt
tccatctcagtgatcgatgagccagacctggaccctcagtttgtcagggagttttactca
gcctctgtgtctgaggacgccaccttggggacatctgtgctggcggtggaagccgtggac
agtgacaaaggcgtcaattacaatgtgacctacaatatcaccaactccacaaggcctggg
tggttctgcatcgagaaggatggggtcatcacagtctgtggccccctggacagagagcag
ctgcttttggataatgaagaagtgcagatacaggtcacggccactgaggagaaacccaac
atctaccagcaagaggccaaggtgagcacctgggtcacaataaaggtgaccgatgtcaac
gaccacaagccggaattttacaactgcagcctccaaaactgcaccttcagcccccaggag
gcccaggacaacttcacaggctatgtggatgagcatgcctctgccagaatctccatcgat
ggtctgaccatggtggcctacgacccagatcagggtgccaatggcacgttcctgctttcc
ctgaatggcacagatgctgaagccttcaacgtgtccccagagcgagcggccgtgtctgtc
agtgtgcaggtggtggtgaaaaattcagagatggtggactacgaaaagaagacggagatg
caagtgcaggttgtggccactgactcagtcagcggcaactactcagttgccacggtgacc
atccaccttcgaaacatcaatgaccaccggcccgtgttctctaagagtttgtatgaactc
actgtgccagagaacagtccaacaggttttctggtcaccgacagcatcgaggctacagac
ctagatggggacgaatggggtcctatcacctacagtctgcttccaggagctggagaagac
ctgtttgaggtggagccaaagtcagggaatgtgacggtgaagaatggcacgctgctggac
cgggagaagcaggccatgtactacctcacgatgcaggccaccgacggtgggaaccagtct
actaccaccatgctgcagatcactctgttggatgtcaatgacaacccacccgtggtccga
ggctcctacaacatctttgtgccagaggaggatggcgatgtctctgtgaccatccaggcc
tatgatgatgaccagccaggcaccaacaacagccgcctgctcttcagcctgcttcctggg
tcctatagccagaacttctccatagacccggacacagggctcctcaggaatcttgagcct
ctggaccgagaggccattgaccctgccctggagggccgcatcgtgctaacggtgcatgtg
gctgactgtggcgagccttccctcagcactgatgtcaatgtcaccatcactgtggaggac
atcaatgacaacctgcctatattcaaccaatcctcttacgaattctttgtgatggagaga
gttccgggagcactggtgggcacagtcaaggcctgggatgctgaccagacagcagccaac
aaccggatcagcttcagcctgtctgggactggcgccaacaactttattctccaaagcatt
gtgttggcactagggtgggcagagggtcacctctggttgctccccgatgtgagcctggat
tatgagacgcagaagctcttcaacctgacagtgagtgcagagaacccaggcccccagggc
ctagaatctacggcaaacatcaccgtggttgtggtggatgtgaatgatgagccacctacc
ctggatgcagtctcactccagagcatctctgtggctgagaatggctctgagcatggccag
gtggctcaggtgatagcccaggacgtggacactaacgccttgctaaggatagagctagtg
gacgtcctctgcactaaggctggcgttgatgtgggcagcgtctgccacggctggttctcc
gtggacaccaatggctctgtgtacatcaatcagagtgaggccattgactatgaggtttgc
cacctggtcacgttggttgtgcgggcacaggacctcgccacagacctcggctttgacgct
tacagcagcaatggaagccttctcatcaacatcaaggacaagaatgacaataccccctac
tttctgcccaacaaccagaccttcgtgatcatcccagagcttgtgttgcccaaccagcag
gtggcttctgtccaggccagagatgaggactcggaagacaacgggatcatcaagttctcc
atcctgaaagcagatttcgtccccaaggacggggctaccaaccctgtccaggtcttccgg
atttcccaatcagtggaagctggcctgtacactggcagcatcgagctggtgaccaacctt
gattccactctccaaggtacataccaggtgacagtccaggcccaggaccagcccgctatg
gatcctgccctcgaaacacagaccactctgaatctcttcactgtggaccagagctaccga
gtgaggctgcagttctccaccagcagggaggatgttggtgccaatatggaggagattaag
gcggcccttatccaggcgaccaggacctctgtgtacgttgtgacaatccagaacatagac
tctatggctcgggcccgagtcaactcctacatggacgcttactttgtcttctccaatggg
tcagccctgactcttaccgagctgaatgtgatgatccggaaagaccaggatgcattgagg
cagctgctgcaactgggactggtggtggtgagctcccaggagacccaggaatttaatcag
acacaactgctcaccaacgtcatcataggactggtggtgtctttggtgctggtccttgtg
atcatgatcacggccctcgtgtgttttcggaagagctaccaccggaagcttcgagctatg
aaggctggcaaagaggcccggaagacaccaatagagacgatgaccccagctgctgctatc
ccagggactaacgtgtacaacactgatcgggccaaccccatgctggacctccccaccaag
gacctgggattggagtgccactcctccagtgacttggactatcacagcctcaattcccta
gacgagaactctgtggacttggacacggacagtaaggaattcaagaggaaggatcttcca
cacaaccctcctgagtctgactcagagcccctgactgcagcgctctcaggaaggtcagca
ggcacaagtggacagcagcagagggagctgtccttcaccaaccctggcctggacaccaca
gatctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

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