KEGG   Rattus norvegicus (rat): 291171
Entry
291171            CDS       T01003                                 
Symbol
Trim27
Name
(RefSeq) zinc finger protein RFP
  KO
K12009  tripartite motif-containing protein 27 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    291171 (Trim27)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     291171 (Trim27)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    291171 (Trim27)
SSDB
Motif
Pfam: SPRY PRY zf-B_box zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_2 zf-RING_5 zf-RING_4 Baculo_IE-1 zf-RING_6
Other DBs
NCBI-GeneID: 291171
NCBI-ProteinID: NP_001128446
RGD: 1310105
Ensembl: ENSRNOG00000055917
UniProt: A0A0G2K8V4 B5DFI5
Position
17:complement(48233999..48246348)
AA seq 513 aa
MASGSVAESLQQETTCPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETF
PQRHMRPNRHLANVTQLVKQLRTERPSGPDGEMGVCEKHREPLKLYCEQDQMPICVVCDR
SREHRGHSVLPLEEAVEGFKEQIQNRLDHLRRVKDLKKRRRAQGEQARAELLSLTQMERE
KIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSGLIAQLEEKQ
QQPTRELLQDIGDTLSRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQS
DMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPERFNLFPCV
LGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWYGKEYWAL
TSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPYFSLSYSG
GKSAAPLIICPMSGIDGFSGHVGNHGHSMETSP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggcctcagggagcgtggccgagtccctgcagcaggagaccacctgccccgtgtgtctt
caatactttgtggaacccatgatgctcgactgcggccacaacatctgttgcgcgtgcctg
gcccgctgctggggtgccgcggagactaacgtgtcgtgcccgcagtgccgggagaccttc
ccgcagcgccacatgcggcccaaccggcacctggccaacgtgacccagctggtgaagcaa
ctgcgcaccgagcggccgtcggggccggacggcgagatgggcgtgtgcgagaagcaccgc
gagcctctgaagctgtactgcgagcaggaccagatgcccatctgcgtggtgtgcgaccgc
tcgcgcgagcaccgtggccacagcgtgctgccgctggaggaggctgtggaaggcttcaag
gagcaaatccagaatcggctggaccacctaagaagagtgaaagacttgaagaagagacgg
agggcacagggggagcaggcacgagctgagctcctgagcctgacccagatggagagggaa
aaaattgtttgggagtttgagcagctgtatcactctttgaaggaacatgagtatcgcctg
ttggctcgccttgaggagctagacttggccatctataatagcatcaacggtgccatcact
cagttctcctgcaacatctcccacctcagtggcctgattgcccaactggaagagaagcag
cagcagcccacgagggagctcttgcaggacattggagacactctgagcagggctgaaaga
atcaggatccctgagccctggatcacacctccagatctacaagagaaaatccatattttt
gcccaaaaatgtctgtttttgacagaaagtctaaaacagttcacagaaaaaatgcagtca
gatatggagaagatccaagagttgagagaggctcaattatactcagttgacgtgaccctg
gacccagacacagcctatcccagcctgattctttcagataatcttcggcaagtacggtac
agttacctccagcaggatcttccagacaaccctgagcggttcaatctgtttccctgtgtc
ttgggctctccatgtttcatcgctgggagacattactgggaggtagaggtgggcgataaa
gccaagtggaccataggtgtctgtgaagactcagtgtgcagaaaaggtggggtgacctca
gccccccagaatggattctgggcagtgtcattgtggtatgggaaagaatattgggctctt
acatccccgatgactgcactccccctgcggacccctctccagagggtagggattttcttg
gactatgatgctggtgaggtttccttctacaatgtgacagagagatgccatacctttact
ttctctcatgctaccttctgtgggccagtccggccctacttcagcctaagttactcggga
gggaagagtgcggctcctttgatcatctgccctatgagtgggattgatgggttttctggc
catgttgggaatcatggtcattccatggagacctctccttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (36)   

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