KEGG   Rattus norvegicus (rat): 291211
Entry
291211            CDS       T01003                                 
Symbol
Ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00900  Terpenoid backbone biosynthesis
rno01100  Metabolic pathways
Module
rno_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    291211 (Ggps1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rno01006]
    291211 (Ggps1)
Enzymes [BR:rno01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     291211 (Ggps1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     291211 (Ggps1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     291211 (Ggps1)
Prenyltransferases [BR:rno01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   291211 (Ggps1)
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 291211
NCBI-ProteinID: NP_001007627
RGD: 1359680
Ensembl: ENSRNOG00000016767
UniProt: Q6F596
Position
17:55958750..55982762
AA seq 300 aa
MEKTKEKAERILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNAS
LLIDDIEDSSKLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLL
ELHQGQGLDIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLDTL
GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
IDIKKYCVQYLEDVGSFEYTRYTLRELEAKAYKQIEACGGNPSLVALVKHLSKMFTEENE
NT seq 903 nt   +upstreamnt  +downstreamnt
atggagaaaactaaagagaaagctgaaagaattcttctagagccttataagtacttactt
caattaccaggtaaacaggtgagaaccaaactttcacaggcatttaatcactggctgaaa
gttccagaagacaagctacagattatcattgaagtgactgaaatgttgcataatgccagt
ttactcattgatgatattgaagacagttcaaagctccgacgtggttttccagttgctcac
agcatctatggtgtcccatctgtcattaactctgccaattatgtctacttccttggcctg
gaaaaagtcttaacacttgatcacccagatgcagtgaagcttttcacacgacagcttttg
gaacttcatcagggacaaggcctagatatttactggagagatacctacacttgtccgact
gaagaagaatataaagccatggtgttgcagaagacaggtggcttgtttggattagccgta
ggcctcatgcagttgttctctgactacaaagaagatctaaagccactgctggacacactt
gggctcttcttccagattagagatgattacgccaatctacactccaaagaatacagtgaa
aacaaaagtttctgtgaagacctgacagaaggaaagttctcatttcctactattcatgcc
atttggtcaaggccagaaagcacccaggtacagaacatcctgcgccaaagaacagaaaat
atagacattaaaaagtactgtgtgcagtacctggaggatgtaggttcttttgaatatacg
cgatacactcttagagagctcgaagctaaagcctacaaacaaatcgaggcctgcggtggg
aacccttcactagtggctttagtcaagcatttaagtaagatgttcacagaagaaaatgaa
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (23)   
   RefSeq(nuc) (7)   
   GenBank (8)   
   EMBL (8)   
Protein domain (1)   
   Pfam (1)   
All databases (57)   

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