KEGG   Rattus norvegicus (rat): 291295
Entry
291295            CDS       T01003                                 
Symbol
Rbm17
Name
(RefSeq) splicing factor 45
  KO
K12840  splicing factor 45
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    291295 (Rbm17)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    291295 (Rbm17)
Spliceosome [BR:rno03041]
 Complex A
  U2 snRNP components
   U2 related factors
    291295 (Rbm17)
 Complex B
    291295 (Rbm17)
SSDB
Motif
Pfam: G-patch RRM_1
Other DBs
NCBI-GeneID: 291295
NCBI-ProteinID: NP_001013076
RGD: 1311208
Ensembl: ENSRNOG00000018767
UniProt: Q6AY02
Position
17:71846941..71863834
AA seq 405 aa
MSLYDDLGVETSDSKTEGWSKNFKLLQSQLQVKKAALTQAKSQRTKQSTVLAPVIDLKRG
GSSDDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYEKVVKRQREERQ
RQRELERQKEIEEREKRRKDRHEASGFSRRPDPDSDEDEDYERERRKRSMGGAAIAPPTS
LVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEPDRPRSPTGPSNSFLANMGGTVAH
KIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKGESQDASKKSDSNPL
TEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIF
LEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLAEQV
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgtccctatatgatgacctgggagtggagaccagtgactcaaaaactgaaggctggtcc
aaaaacttcaagcttctgcagtcccagctccaggtgaagaaggcagctctcactcaagcc
aagagccaaaggacaaagcaaagtacagtcctcgctccagtcatcgacctgaagcgagga
ggctcctcagatgaccgacagatcgtagacacgccacctcatgtggcagctgggctgaag
gaccctgtgcccagtgggttctctgcaggggaagtcctgatccccttggctgatgaatat
gacccaatgtttcctaacgactatgagaaagtggtgaagcgccagagagaagagcggcag
aggcagcgggagctggaaagacagaaggaaatagaggaaagagaaaagaggcgtaaagac
agacatgaagccagtgggttttcaagacgcccagacccggactcggatgaggatgaagat
tatgagcgagagcggaggaaaagaagtatggggggagctgccatcgccccaccgacctct
ctggtagagaaagacaaagagttaccccgagattttccctatgaagaggactcaagacct
cgatcacagtcttccaaagctgctattcctcccccagtgtatgaggagccggacagacca
aggtctccaaccggccccagcaactccttcctcgctaacatgggtggcaccgtggctcat
aagatcatgcagaagtatggcttccgggaaggtcaggggctggggaaacatgagcaaggg
ctaagcactgcattgtccgtggagaagaccagcaagcgtggcggcaagatcattgttggt
gacgccacagagaagggcgagtctcaggatgcatccaagaagtcggattcaaatccatta
actgaaattcttaagtgccctactaaagtggtcttgctgaggaacatggtcggtgcagga
gaggtcgatgaagacttggaagttgaaaccaaggaagaatgtgaaaaatatggcaaagtt
gggaaatgtgtgatatttgagattcctggtgcccctgatgatgaagcagtacggatattt
ctagaatttgagagagtcgaatcggcaattaaagctgttgtcgatctgaatgggaggtat
tttggtggacgggtggttaaagcctgtttctacaatttggataaattcagggtcttggat
ctagcagagcaagtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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