KEGG   Rattus norvegicus (rat): 291309
Entry
291309            CDS       T01003                                 
Symbol
Usp6nl
Name
(RefSeq) USP6 N-terminal-like protein
  KO
K20133  USP6 N-terminal-like protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    291309 (Usp6nl)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    291309 (Usp6nl)
SSDB
Motif
Pfam: RabGAP-TBC
Other DBs
NCBI-GeneID: 291309
NCBI-ProteinID: NP_001099590
RGD: 1311786
Ensembl: ENSRNOG00000017644
UniProt: D3ZL57 A6JLX0
Position
17:complement(76737870..76865953)
AA seq 816 aa
MNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDADYLVYKVTDRFGFLHEEELPYPN
AAADRQKQLEIERTSKWLKMLKRWERYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMK
EETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYN
TEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPKLLRFQEHHEK
ILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFRLNLRIWDIYIFEGERILTAMS
YTILKLHRKHLMKLSMEELVEFLQETLAKDFFFEDDFVIEQLQVSMTELKRAKLDLPEPG
KEDEYPRKPLGQLPPEYTNHLSNGQRSVGRPSPKISSRREDGSPHKAHEHSPAHHSRNGT
PERVGQSRRKSVDEGSKNLKQEADFQRKPSSGTQDNSKHYNHATANQNSNALSNIRKEFV
PKWRKPSEASAIERTAKYAIEGRSHSVFPALSVAVPSSAETRLSNSRQKMKAFDGGEGNR
GSNASQYDNVPGSESEPGASAEEGPERTHPHSPRKHSEPSPSPSKVPNKFTFKVQPPSHV
RYPSQPAGEDHRAAYPPSYSNPPVYHGNSPKHIPTAHSGFASTQISLGPQVNPSRRPYGS
SLSGDTSPEKSYGRLTPVLPSSRIEVLPIDIGARGYGSSGSPKSGKFILPPVDYLPENRK
WSEFSYTYRPEVHGQSWTQDATRSHLSNLPKYTAFPHIPLQDHGLPEVSVDSPVRYKTSP
AVEEASPPGYPYAGPTPSAHHYRNREGLSVQESVLL
NT seq 2451 nt   +upstreamnt  +downstreamnt
atgaattcggaccaggatgtagcgctcaaactcgctcaggaacgagctgaaatagttgct
aaatatgacagaggacgggaaggtgcagagatcgagccctgggaagatgctgattatctt
gtttacaaagtcaccgatagatttggctttttacatgaggaggagctcccgtatcctaac
gcagccgcggaccggcaaaagcaactggaaatcgaaaggacttccaagtggctgaaaatg
ctgaagagatgggagagatacaagaacactgagaagttccatcgacgaatttacaaagga
attccactccagctccgaggtgaagtctgggcccttcttcttgagatccctaaaatgaaa
gaagaaacaagagacctctatagtaaattaaagcacagagcacggggttgttcgcctgat
atcagacaaatagaccttgacgtgaaccgcacattcagggaccatatcatgtttagagac
agatatggtgtcaagcagcaatccttgttccacgttcttgctgcctactccatctacaat
acggaggtcgggtactgtcaagggatgagtcagatcacagctctgctcctgatgtacatg
aatgaggaggacgccttctgggccctggtcaagctcttctcaggccccaagcacgccatg
catggtttttttgtccaaggtttccctaaactcttgagatttcaagaacatcatgagaaa
attctgaacaaatttttgtccaaactaaagcagcacttggattctcaagaaatctataca
agtttttacacaatgaagtggttttttcagtgtttccttgaccgaactcccttcaggctg
aacctccggatctgggacatctacatctttgagggagagcgaattctcactgctatgtct
tatacaatcttgaagctacacagaaagcatctaatgaagttgtctatggaagaacttgta
gaatttcttcaggagactctcgccaaggactttttcttcgaggatgatttcgtaatagag
caactgcaggtctctatgacagagttaaagcgggccaagttagatctcccagaacctggt
aaggaggatgaatacccaaggaaacccctggggcagctcccacctgagtataccaatcac
ttgagcaatggacaaagaagtgttggcaggcccagccccaaaataagcagcaggagagaa
gatgggtcgcctcacaaggcacatgagcactctcctgcccatcacagcagaaatggcacc
ccagaaagagtcgggcagtcaagacgcaagtctgtggatgagggtagtaaaaatctgaag
caggaggcagattttcagagaaaaccttcatcgggcacacaggacaactccaagcattat
aaccatgcaactgctaaccaaaatagcaatgcactttccaacatcaggaaggagttcgtg
cccaaatggaggaagccatcggaggcctcagctatcgaaagaactgctaaatacgccatt
gaaggcagaagtcactcagtgtttcccgctctctctgtcgcagtcccaagttctgctgag
acccgattgtcaaactcaaggcaaaagatgaaggcttttgatggtggtgaggggaaccgg
ggttctaatgcttcccagtatgacaacgtacctgggagtgagagcgagcctggagcgtct
gcagaggagggaccggagcggactcaccctcacagtccaaggaagcactctgagccaagt
cccagtccatcaaaagtacccaacaagtttacctttaaagtgcagcctcccagccatgta
cgatacccatcccagccagcaggggaggatcacagagctgcatatccaccctcctacagc
aacccgcctgtctaccatggaaattctccaaaacacatccctacggcccacagtggcttt
gcgtccacacagatcagcctggggcctcaagtgaacccttccaggagaccttacggttcc
tctctttcaggtgacacttctccagagaagtcctacggccgcctaactcctgttcttccc
tctagtcgaattgaagtccttcccatagacattggtgccaggggatacggcagttcaggg
tcaccaaagagcggaaagttcatccttcccccggtggactatttgcctgagaacagaaaa
tggtcagaatttagttacacatacagacctgaggtgcatggtcagtcatggactcaggat
gctacccgtagccacttaagcaatttaccaaaatacacagcctttccgcacatacctctt
caggaccacggccttccagaagtgtctgtagacagtccagtgaggtataagacttcacca
gctgtggaagaggccagtcctcctgggtatccatacgcagggcccacaccttcagcacat
cactacagaaatcgagagggcctgtctgttcaggaatcagtgttgctatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

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