KEGG   Rattus norvegicus (rat): 291324
Entry
291324            CDS       T01003                                 
Symbol
Trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase
  KO
K15336  tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    291324 (Trdmt1)
Enzymes [BR:rno01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.204  tRNA (cytosine38-C5)-methyltransferase
     291324 (Trdmt1)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    291324 (Trdmt1)
SSDB
Motif
Pfam: DNA_methylase MTS
Other DBs
NCBI-GeneID: 291324
NCBI-ProteinID: NP_001026813
RGD: 1306292
Ensembl: ENSRNOG00000026132
UniProt: Q4G073 A6JM42
Position
17:complement(81510740..81554036)
AA seq 391 aa
MEPLRVLELYSGIGGMHHALRESRVPAHVVAAIDVSTVANEVYKHNFPHTHLLAKTIEGI
SLEEFDKLSFNMILMSPPCQPFTRIGLQGDMSDRRTNSFLYILDILPRLQKLPKYILLEN
VKGFEVSSTRGLLIQTMEACGFQYQEFLLSPSSLGIPNSRLRYFLIAKLQSEPLCFQAPG
QILMEFPNSGTVQPQEYAVVEEGKLRVRTREPDVCLDSSSTQCSGQDSILFKHETAADID
RKRQQDSDLSVQMLKGFLEDGDTAQYLLPAKSLLRYALLLDIVKPTSRRSMCFTKGYGSY
IEGTGSVLQTAEDVQIENIYKSLPDLPPEEKIAKLSMLKLRYFTPKEIANLLGFPPEFGF
PEKTTVKQRYRLLGNSLNVHVVSKLLTVLCE
NT seq 1176 nt   +upstreamnt  +downstreamnt
atggaacctctgcgtgtcctggagctgtacagtggcattgggggcatgcaccacgcgctg
cgagaaagccgtgtccctgcacatgtggtggctgctattgacgtgagcactgttgctaac
gaagtatacaagcataacttccctcatacacacttactggcaaagacaatcgaaggtatt
tcactggaagagtttgacaagctatctttcaatatgattttaatgagccctccatgtcag
ccattcacaagaattggcctacagggggacatgagtgatcgaaggacaaatagcttcttg
tatattctagatattctcccaaggttacagaagttacccaagtatattcttttagaaaat
gtcaaagggtttgaagtttcttctacaagagggctgctgatacaaacaatggaagcctgc
ggctttcagtatcaagagtttctgttgtctccgtcctctctaggcattccaaactcaagg
ctacggtattttctcattgcgaagcttcagtcagagcctctctgtttccaggcccctggc
cagatactgatggagtttcctaatagtggaacagttcagccacaagaatatgcagtagtt
gaagaaggcaagctgagagtgaggacaagggagccagatgtctgccttgatagcagcagc
acccagtgctctggacaagatagcattctttttaagcacgagactgcagcagacattgac
aggaagcgccaacaggacagtgacctctctgtgcagatgctgaaaggtttccttgaagat
ggtgacacagctcagtaccttctgccagcgaagtcgctgctgcgctacgctctcctcctc
gacatcgttaagcccacctccaggaggtccatgtgcttcactaaagggtatggaagctac
atagaagggacaggctctgtgttacagactgcagaggatgtgcagattgagaatatctac
aaatctcttcctgatttgccaccagaagagaagatagctaaattgtcaatgcttaaactg
cgatatttcacacctaaagaaattgcaaatctcctgggatttcctccagaatttgggttt
cctgagaagacaacggtgaagcagcgttaccggctgctcggcaacagcctcaacgtgcat
gtcgtctcaaagctccttacagtcctgtgtgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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