KEGG   Rattus norvegicus (rat): 291427
Entry
291427            CDS       T01003                                 
Symbol
Loxhd1
Name
(RefSeq) lipoxygenase homology domain-containing protein 1 isoform 1
  KO
K24822  lipoxygenase homology domain-containing protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    291427 (Loxhd1)
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    291427 (Loxhd1)
Cilium and associated proteins [BR:rno03037]
 Other cilia and associated proteins
  Stereociliary proteins
   291427 (Loxhd1)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Other domain-containing proteins
  Others
   291427 (Loxhd1)
SSDB
Motif
Pfam: PLAT ATS3 BUD22 RR_TM4-6
Other DBs
NCBI-GeneID: 291427
NCBI-ProteinID: NP_001099602
RGD: 1304815
Ensembl: ENSRNOG00000017410
Position
18:73093142..73245784
AA seq 2216 aa
MMPQKKKRRKKDIDFLGLYEEELLNYNSEDDEDELEHEYYKAKVYEVVTATGDVRGAGTD
ANVFITIFGENGLSPKLHLTSKSESAFEKANVDVFRVRTNNVGLIYKIRIEHDNTGLNAS
WYLDRVIVTDMKRPHLRYYFNCNNWLSKVEGDRQWCRDLLASFDPMDMPRGNKYEIKVYT
GDVIGAGTDADVFINIFGEYGDTGERRLENEKDNFEKGAEDKFTLDAPDLGQLMKINVGH
NNKGGSAGWFLSKIIIEDIGNKRKYDFPLNRWLALDEDDGKIQRDILVGGAETTAITYIV
TVFTGDIRGAGTKSKIYLVMYGARGNRNSGKIFLEGGVFDRGRTDIFHIDLAVLLSPLSR
VSIGHGNIGVNRGWYCEKVVVLCPFTGIQQTFPCSNWLDEKKADGLIERQLYEMVSLRKK
RLKKFPWSLWVWTTDLKKAGTNSPIFIQIYGKKGRTDEILLNPNNKWFKPGIIEKFRMEL
PDLGRFYKIRAWHDRQNPGSGWHLEKMTLMNTLNKDKYNFNCNRWLDANEDDNEIVREMT
AEGPTVRRIMGMARYRVTVCTGELEGAGTDANVYLCLFGDVGDTGERLLYNCRNNTDLFE
KGNADEFTIESVTMRKVRRVRVRHDGKGSGSGWYLDRVLVREEGQPESDNVEFPCLRWLD
KDKDDGQLVRELLPSDSNATLKNFRYHISVKTGDVSGASTDSRVYIKLYGEKSDTIKQVL
LVSDNNLKDYFERGRVDEFTLETLNIGTIIRLVIGHDSTGMHAGWFLGSVQIRVPRQGKQ
YTFPANRWLDKNQADGRLEVELYPSEVVEIQKLVHYEIEIWTGDVGGAGTTSRVYVQIYG
EEGKTEVLFLSSRSKVFDRGSKDIFQLEAADVGEIYKIRLGHTGEGFGPSWFVDTVWLRH
LVVQEESLTPEEEARRKKEKEKLRQLLKKERLKAKLQRKKKKKKKGSDEEEEGDEEEESS
SEESSSEEEEEEESEEEEEEEEYGPGMQEVIVQYKFVANRWLARGKEDNELVVELVPAGQ
PGPEPNTYEVQVITGNVPKAGTDANVYLTIYGEEYGDTGERPLKKSDKSNKFEQGQTDTF
TIYAIDLGALTKIRIRHDNTGNRPGWFLDRIDITDVNNETTYYFPCQRWLAVEEDDGQLS
RELLPVDESYVLPSEDEEGGGQGDNNPLDNLALEQKDKSTTFSVTIKTGDKKNAGTDANV
FITLFGTKDNNGMTLLKSSKTNSDKFERDSIEIFTVETLDLGDLWKVRIGHDNTGKAPGW
FVDWVEVDAPSLGKCMTFPCGRWLAKNEDDGSIVRDLFHAELQTRLYTPFVPYEITLYTS
DVFAAGTDANVFIVIYGCDAVCTRQKFLCTNKREQKLLFERKSASRFIVELEDVGEIIEK
IRIGHDNTGINPGWHCSHVDIRRLLPEKDGTETLTFPCDRWLATSEDDKKTIRELVPYDI
FTEKYMKDGSLRQVYKEVEEPLDIVLYSVQIFTGNVPGAGTDAKVYITIYGDLGDTGERY
LGKSENRTNKFEKGTADTFIIEAADLGVIYKIKLRHDNTKWCADWYVEKVEIWNDTNEDE
FLFLCGRWLSLKKEDGRLERLFYEKEYTGDRSSNCSSPADFWEIALSSKMADVDIDTVTG
PMVDYVQDGPVIPYYVSVTTGKHKEAATDSRAFVLLIGEDDERTNRIWLDFPQGKRGFSC
GSVEEFYVGGLDVGIIKKIEVLYEMTVWTGDVVGGGTDSNIFMTLYGINGSTEEVQLDKK
KARFEREQNDTFIMEILDIAPFTKMRIRIDGLGSRPEWFLERILLKNMNTGDLTMFYYGD
WLSQKKGKKTLVCEICAVIDGEEMMEWTSYTVSVKTSDILGAGTDANVFIIIFGENGDSG
TLALKQSANWNKFERNNTDTFNFPDMLSLGHLCKLRVWHDNKGIFPGWHLSYIDVKDNSR
DETFRFQCDCWLSKSEGDRQTLRDFACANNEIRDELEETTYEIVIETGNGGETRENIWLI
LEGRKNRSKEFLVENSSRQRAFRKGTTDTFEFDSIFLGDIASLCVGHLAREDRFIPKREL
VWHVKTITITEMEYGNVYFFNCDCLIPLKRKRKYFKVFEVTKTTESFASKIQSLVPVKYE
VIVTTGYEPGAGTDANVFVTIFGANGDTGKRELKQKMRNLFERGSTDRFFLETLELGELR
KVRLEHDSSGYYSGWLVEKVEVTNTSTGVATIFSCGRWLDKSRGDGLTWRELFPSV
NT seq 6651 nt   +upstreamnt  +downstreamnt
atgatgccccagaagaagaagcggcggaagaaagacatcgacttcctgggcttgtacgag
gaggagctgctgaactacaactcggaggatgatgaggatgagttggagcacgaatactac
aaagccaaggtgtacgaggtggtcacagccacaggggatgttcgtggcgcagggacagat
gccaacgtgttcatcacgatctttggagagaacgggctctctcccaagctccatctcacc
agcaagagcgagtctgcttttgagaaagccaacgttgatgtattccgggtacggaccaat
aacgtgggcctcatctataaaatcaggatcgagcatgataacacaggcctgaatgccagc
tggtacctggaccgggttatagtgacggacatgaagaggcctcacctccgctattacttc
aactgtaacaactggctgagcaaggtggagggtgaccgtcagtggtgccgtgacctcctg
gccagcttcgaccccatggacatgcccagaggaaacaaatatgaaatcaaggtatacact
ggtgatgtgattggtgcagggacagatgctgatgtctttatcaatatctttggagagtat
ggagacacaggggagcgtaggctggaaaatgagaaagacaactttgaaaagggagctgaa
gacaagttcacactggatgcaccagatttggggcagctgatgaagatcaatgtgggccac
aacaacaaggggggttcggcaggttggttcctgtccaagatcatcattgaagatattggg
aacaaaaggaaatatgatttcccccttaaccgctggctggccctggatgaagatgatggc
aaaatccagagagacatcttagtgggcggagctgagaccacagccataacctacattgtc
actgtcttcactggggatatccgtggagctgggaccaaatctaaaatctatttggtcatg
tacggagccagaggaaataggaacagtggaaaaatctttctggaaggtggtgtgttcgac
aggggccgcacagacatcttccacatcgacctggctgtcctccttagcccactgagccgg
gtctccattgggcacggcaacataggcgtcaaccgaggctggtactgtgagaaggtggtg
gtactgtgccccttcactggcatccagcagactttcccgtgcagcaactggttggatgag
aagaaggcagacggactgattgagcgtcagctctatgagatggtgtctctgaggaagaag
cggctgaaaaaatttccttggtccctttgggtctggacaactgatctgaagaaagctggc
accaactcgcccatcttcatccagatttatgggaagaaggggcggacagacgagattctt
ctgaatcccaacaacaaatggttcaaaccaggcatcattgagaagttcaggatggagctc
ccagatctcgggaggttttataagattcgggcgtggcatgacaggcagaatcctggctct
gggtggcatttagaaaagatgactctgatgaataccttgaataaggacaaatataacttc
aactgcaaccgctggctggatgccaatgaggatgacaatgagatcgtgagggagatgacc
gcagaaggcccgactgtacggaggataatgggaatggcccggtatcgtgtgactgtatgc
acaggggaacttgaaggtgcaggaactgatgccaacgtctacctctgcctttttggtgat
gtgggggacacaggggagagactgctttacaactgcagaaataacaccgacctgtttgag
aaaggcaatgcggatgaatttaccattgagtctgtcactatgaggaaggtgaggcgagtg
agggtcaggcacgacggcaaaggctcgggcagcggctggtacctggacagggtgctggtg
agagaggaagggcagccagagagtgacaacgtggagttcccctgcctcaggtggctggac
aaagacaaggatgatgggcagctggtccgagagttgctacccagtgacagcaatgccacg
ctcaagaacttccgctatcacatcagcgtgaagacgggggatgtctctggggccagcaca
gattctcgggtgtacatcaagctctatggagagaaatctgacaccatcaagcaagttctt
ctcgtctctgacaacaacctcaaagactactttgaacgtggccgagtggatgagtttact
ctggagaccctgaacataggaactatcatcaggctggtgattgggcacgacagcactggc
atgcatgcaggctggttcctgggtagcgtccagatccgcgtgccccgccaaggcaagcag
tacaccttccctgccaaccggtggctggataagaaccaggctgatgggcgtctggaggtg
gagctgtaccccagcgaggtggtggagatccagaaattggtccactacgagattgagatt
tggaccggagatgtgggtggtgccggcaccacttcccgagtctacgtgcagatctacggg
gaagaaggcaagaccgaagtactcttcctctccagccgctccaaagtgtttgatcggggg
tccaaggacatattccagctggaagcggcggacgtgggcgagatctacaagatccgactg
ggacacacgggcgagggctttgggcccagctggtttgtggacacagtgtggctgcggcac
ctggtggtgcaggaggagagcctgacgccggaggaggaggcccggaggaagaaggagaag
gagaagttgcggcagctgttgaagaaggaaaggctgaaggctaagctgcagcggaagaag
aagaaaaagaagaaaggcagcgatgaggaggaggagggcgatgaggaagaagagtcctcc
tcagaagagtcctcctctgaagaggaggaggaggaggagtcagaggaggaagaggaggaa
gaggagtatgggccagggatgcaggaggtgattgtgcagtacaagttcgtcgctaaccgc
tggctggcccggggcaaggaggacaatgaacttgtcgtggaattggttccagctggtcag
ccgggtcctgagcccaatacctacgaggtccaggtgatcacagggaacgtacccaaggct
ggcactgatgccaacgtctacctgaccatctacggtgaggaatacggggacacaggggag
cgacccctgaagaaatcagacaagtccaacaagtttgagcagggccagacagataccttc
accatctatgccattgacctgggggctcttaccaagattcggatccgtcatgataacacg
ggcaacaggccgggctggttcctggacagaatagacatcaccgacgtgaataacgagacc
acgtactacttcccgtgccagcgctggttagcagtcgaggaggatgacggccagttatcc
agggagctgctgccagtggatgagtcctacgtgctacctagtgaagacgaggagggcggg
ggccagggtgacaataatcccctcgacaacctggctctggagcagaaagataaatcaacc
acattttcagtgaccataaagactggggacaaaaagaacgcaggcacagatgccaacgtc
ttcatcacgctctttggcacgaaagataacaacgggatgaccctcctgaagtcctccaaa
accaacagtgacaaatttgaaagggacagcattgaaatcttcaccgtggagacgctggat
ctgggagacctttggaaagttaggatcggccatgacaacacaggcaaggccccaggctgg
tttgtagactgggtggaggtggatgccccatctcttgggaagtgcatgacctttccctgc
ggccgttggttggccaagaatgaggacgacgggagcatcgtcagggatctcttccacgcg
gagcttcagacacggctctacacgccatttgtcccttatgagatcaccctctacaccagc
gatgtctttgctgctgggacggacgccaacgtcttcatagtcatctacggctgtgatgcc
gtgtgcacccggcagaagttcctgtgcaccaataagagggaacagaagctgctcttcgag
aggaagtcagcctcccgctttattgtagagttagaagacgtgggtgagatcatagaaaaa
attcggattggccatgacaacacaggcataaaccctgggtggcactgctcccacgtggac
atccgcaggctcctccccgagaaagacggtacagaaaccttgactttcccctgtgatcga
tggctcgccacctctgaggatgacaagaagaccatccgagaactggtcccctatgacatc
ttcactgagaagtacatgaaagatggatccttaaggcaggtctacaaggaagtggaggaa
cctctggacattgtgctgtactctgtgcagatcttcacagggaatgttcctggggcgggg
acagatgccaaggtctacatcaccatctacggagacctcggggacactggggagcggtac
cttggcaagtcagagaaccgcaccaacaagtttgagaaaggaacggctgacaccttcatc
atcgaggccgctgacctgggtgtcatctacaagatcaagctccgccatgacaacaccaag
tggtgtgccgactggtatgtggagaaggtggagatatggaatgacaccaatgaggacgag
tttctattcctgtgtgggcgctggctatccctgaagaaggaggatgggcggctggagagg
ctcttctatgagaaggagtacactggagaccgcagcagcaactgcagcagcccggctgac
ttctgggagatcgccctgagttccaagatggcagacgtggacattgacacagtgacagga
cccatggttgactatgttcaggatggccccgtgatcccctactatgtatcagtgactact
gggaagcacaaggaggcagccactgatagccgcgcctttgtcctgctcattggggaagat
gatgaacgtaccaaccgcatctggctggactttccccaggggaagcgaggcttcagctgt
ggctctgtggaggagttctacgttggtggcttggatgtgggcatcatcaagaaaatagag
gtgctgtatgaaatgacggtgtggactggcgatgtggtcggtggaggcactgactccaat
atcttcatgaccctctatggcatcaacgggagcacagaagaggtgcagctggacaagaag
aaggccaggtttgagcgggaacaaaatgacaccttcatcatggagatcctggacattgct
ccctttacgaagatgcgcatccgtatcgacgggctggggagccggccagagtggttcctg
gagaggatcctgttgaagaacatgaacacaggggacctgaccatgttctactacggagac
tggctgtcccaaaagaagggaaagaagacactggtgtgtgaaatatgtgcggtcattgat
ggagaggagatgatggagtggacgtcctacacagtctcggtgaagaccagtgacatcttg
ggggcaggcacggacgctaatgtgttcatcatcatctttggggaaaatggagacagcggg
accctggccctgaaacagtcagccaactggaacaagtttgagcggaacaacacagacacc
ttcaattttcctgacatgctgagcctgggccacctctgcaaactgagggtctggcatgac
aacaaagggatatttcctggatggcatctgagctacattgacgtgaaggacaattcccgt
gacgagaccttccgcttccagtgtgactgctggctgtctaagagtgagggtgacagacaa
acgctccgagacttcgcgtgtgccaacaatgagatccgcgatgagctggaagagaccacc
tacgagattgtcatagaaacaggcaacggaggcgaaaccagagagaacatctggctcatc
ttggaaggcaggaagaacagatccaaggaattccttgtggaaaattcttccagacagcgg
gcctttcggaaggggaccacagacacctttgagtttgacagcatcttcttgggtgacatc
gcctccctctgtgtgggccacctggcaagggaggaccggttcatccccaagagagagcta
gtctggcatgtcaagaccatcaccatcaccgagatggagtatggcaacgtgtacttcttt
aactgtgactgcctcatccccctcaagaggaagaggaagtacttcaaggtattcgaggtc
actaaaacgacagagagcttcgccagtaagatccagagcctggtgccagtcaagtacgag
gtcatcgtgacgacgggctacgaaccaggggcgggcactgatgccaacgtcttcgtgacc
atctttggcgctaacggggacacgggcaagcgcgaactgaaacagaaaatgcgcaacctc
ttcgagaggggcagtacagaccgcttctttctggagacattagagctgggagagctgcgc
aaggttcggctggaacatgacagcagtggctactactcgggctggctggtggagaaggtg
gaggtcaccaatactagtactggagtggccaccatcttctcctgcggcaggtggttagac
aagtctcggggcgatgggctcacctggcgagagctcttcccgtccgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system