KEGG   Rattus norvegicus (rat): 29143
Entry
29143             CDS       T01003                                 
Symbol
Grn
Name
(RefSeq) progranulin isoform a precursor
  KO
K23879  progranulin
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    29143 (Grn)
Membrane trafficking [BR:rno04131]
 Endosome - Lysosome transport
  Others
   Others
    29143 (Grn)
SSDB
Motif
Pfam: Granulin Lustrin_cystein
Other DBs
NCBI-GeneID: 29143
NCBI-ProteinID: NP_058809
RGD: 61983
Ensembl: ENSRNOG00000021031
UniProt: P23785 G3V8V1 A6HJK0 Q6IN42
Position
10:87887834..87893938
AA seq 602 aa
MPPRERGPRRRQTMWILVSWLALVARLVAGTQCPDGQFCPVACCLDQGGANYSCCNPLLD
TWPIITSRRLDGSCQIRDHCPDGYSCLLTVSGTSSCCPFSEGVSCDDGQHCCPRGFHCSV
DGKSCSQISDSLLGAVQCPGSQFECPDSATCCIMIDGSWGCCPMPQASCCEDRVHCCPHG
ASCDLVHTRCISPTGTHPLLKKFPAQRTNRAVAFPFSVVCPDAKTQCPDDSTCCELPTGK
YGCCPMPNAICCSDHLHCCPQDTVCDLIQSKCISKDYTTDLMTKLPGYPVNEVKCDLEVS
CPDGYTCCRLNTGAWGCCPFTKAVCCEDHIHCCPAGFQCHTETGTCELGVLQVPWMKKVT
ASLSLPDPQILKNDVPCDDFSSCPSNNTCCRLSSGDWGCCPIPEAVCCLDHQHCCPQGFK
CMDEGYCQKGDRMVAGLEKMPVRQTTLLQHGDIGCDQHTSCPVGQTCCPSLKGSWACCQL
PHAVCCEDRQHCCPAGYTCNVKARTCEKDAGSVQPSMDLTFGSKVGNVECGAGHFCHDNQ
SCCKDSQGGWACCPYVKGVCCRDGRHCCPIGFHCSAKGTKCLRKKTPRWDILLRDPAPRP
LL
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgcctcccagggagcgcggaccccgacgcaggcagaccatgtggatcctggtgagctgg
ctggccttagtggcaaggctggtggctggaacacagtgcccagatggtcaattctgccct
gttgcctgctgccttgaccagggaggagccaactacagctgctgtaaccctcttctggac
acatggcctataataacgagccgtcgtctagatggctcctgccagatccgtgaccactgt
cctgatggctactcttgtcttctcactgtgtctgggacttccagctgctgcccgttctct
gagggtgtatcttgtgatgatggccagcactgctgcccccggggcttccactgtagtgtg
gatgggaaatcctgctctcagatatcagatagcctcttgggtgctgtccagtgtcctggt
agccagttcgaatgtcctgactccgccacctgctgtattatgattgatggttcctggggg
tgctgccccatgccccaggcctcttgctgtgaagacagagtgcattgctgtccccacggg
gcctcctgtgacctggttcacacgcgatgcatttcacccacgggcacccaccccttacta
aagaaattccccgcacaaaggaccaacagggcagtggctttccctttttccgtggtgtgc
cctgatgctaagacccagtgccctgatgactctacctgctgtgagctacccactgggaag
tatggctgttgtccaatgcccaacgccatctgctgttccgaccacctgcactgctgcccc
caggacactgtatgtgacctgatccagagcaagtgcatatccaaggactacaccacagat
ctcatgaccaagctgcctggatacccagtgaatgaggtgaagtgcgacttggaggtgagc
tgtcctgatggctacacctgctgccgcctcaacactggggcctggggctgctgtccattc
accaaggctgtgtgttgtgaagaccacattcactgctgcccagccgggtttcagtgtcac
acagagacaggaacctgtgaactgggagtccttcaggtaccctggatgaaaaaggtcacg
gcctccctcagcctgccagacccacagatcttgaagaatgatgtcccctgtgatgacttc
agtagctgtccttctaacaatacctgctgcagactcagttctggggactggggctgctgt
cccatcccagaggctgtctgctgcttagaccaccagcattgctgccctcagggtttcaaa
tgtatggatgaggggtactgtcagaagggagacagaatggtggctggcctggagaagatg
cctgtccgccagacaactctgctccaacatggagatattggttgtgaccagcataccagc
tgcccagtagggcaaacatgctgcccaagcctgaagggaagttgggcctgctgccagttg
ccccatgctgtgtgctgtgaggaccggcagcactgttgcccggctgggtacacctgcaac
gtgaaggcgagaacctgtgagaaggatgcaggctctgtccagccttccatggacctgacc
tttggctctaaggttgggaatgtggaatgtggtgccggacatttctgccatgataaccag
tcctgttgtaaagacagccaaggaggctgggcctgctgtccctatgtaaagggtgtctgc
tgtagagatggacgtcactgttgtcccattggcttccactgttcagccaagggaaccaag
tgtttgcggaagaagacccctcgctgggacatacttttgagggatccagccccaagaccg
ctactgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (4)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (15)   
   RefSeq(nuc) (3)   
   GenBank (6)   
   EMBL (6)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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