KEGG   Rattus norvegicus (rat): 291439
Entry
291439            CDS       T01003                                 
Symbol
Mbd1
Name
(RefSeq) methyl-CpG-binding domain protein 1
  KO
K11589  methyl-CpG-binding domain protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    291439 (Mbd1)
   03036 Chromosome and associated proteins [BR:rno03036]
    291439 (Mbd1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    291439 (Mbd1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    291439 (Mbd1)
SSDB
Motif
Pfam: MBD zf-CXXC
Other DBs
NCBI-GeneID: 291439
NCBI-ProteinID: NP_001011924
RGD: 1305980
Ensembl: ENSRNOG00000024104
UniProt: Q66HB8
Position
18:70145093..70159744
AA seq 533 aa
MAEAWQDCPALGPGWKRREAFRKSGASCGRSDIYYRSPTGEKIRSKIELTRYLGPACDLT
LFDFRQGILCHPVPKTHPLAVPSKKKKKTSKPAKAKKQQVGPQRSEVRKETPREGNKVAP
ATALLPVTASAPAPVPVPVSAPAPAPAPLCCENCGIHLSWDGIKRERRRTLCKDCRAQRI
AFNREQRMFKRVGCGECTACLVKEDCGVCSICCLQLPNDVASGLFCKCEQRRCLRIVEKG
KYDHSKRGPRVASRRHSRAPPLPPHAASQHPEPTELHISDQTPTAPAEFVYDCVEEDELK
RLLPSIGPGSEEEARLLPHHTHQKRSASTRQLQLSSPLKAPLAVVTTPPGPVQDSGKRQA
GSGFVLPQPDTDLVYLQEGTSSLMQVPGPAAASTENPAQETQGSAPGWVVALPQVKQEKA
DAPEEWTAVTTFLTSSTVQPGFLSKASGLDPPPVKREPPGPEEDGEENKEDDVSESAPAE
EIGGIGTPVITEIFSLGGTRLRDAEAWLPRLHKLLAVNENEYFTELQLKEEIL
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggctgaggcctggcaggactgcccagccctgggccctggctggaaacgccgagaggcc
tttcgaaagtcaggggcctcgtgtggacgctcagacatctattatcggagccccacagga
gaaaagatccgaagcaaaattgagctgactcgatacctgggccctgcatgcgatcttacc
ctgtttgacttcagacaaggcatcttatgccacccagttcccaagacccatcccttggct
gtccccagcaagaagaaaaagaagacttctaaaccagccaaggctaagaaacagcaggtt
gggccacagagaagtgaggtcaggaaagagactccacgggaaggaaataaggtcgctcct
gccacagctttattacctgtgactgcgtctgcgcctgcacctgtgcctgtgcctgtgtct
gcacctgcgcctgcacctgcacctttgtgctgtgagaattgtggaatccacctgtcatgg
gatggtatcaaaagggagagacgcaggacattgtgcaaagactgccgagcacagagaatt
gccttcaaccgagaacagcgaatgtttaagcgagttggctgtggggagtgcacagcttgc
ctggtgaaagaagactgcggggtgtgctccatctgctgcctgcagctgcccaacgatgtg
gcctcagggctcttctgcaagtgtgagcagagacgctgcctgcggattgtggagaagggt
aaatatgatcatagtaagagaggcccgagggtagcttctcgacgtcactcccgagccccg
ccacttcctccacacgctgcgtcacagcatccagagcccacagaactgcacatcagcgac
caaacgcccacagcacctgctgagttcgtctatgactgtgtagaggaggacgagctaaag
cggctgctgcccagtattgggccagggtctgaggaggaagcaagattgcttccacatcat
acccaccaaaagaggtctgcttctactcgacagctgcaactgagctctcccttaaaggct
cctttggctgtggtcacaaccccaccgggccctgtccaagattcagggaagcggcaagca
ggtagtggctttgtactgccccaacctgacacagaccttgtgtatttacaagagggtacc
agcagtctcatgcaggtgcctggccctgctgcagcttccacagaaaacccagcacaggag
acccagggctctgccccaggttgggttgtggccttgccccaggtgaagcaagagaaggcg
gatgccccagaggagtggacagcagtcacaaccttcctgacttcttccacggtgcagcct
ggcttccttagcaaggcgtcaggcctggaccctccacctgtgaaacgagagccccctggc
cctgaggaggatggagaagagaacaaagaagatgatgtctctgaatcagctccagcagaa
gagataggagggattggcaccccagtgatcacggagattttcagcctgggtggaacccgc
ctccgggatgcagaagcctggttgccaaggctacataaactgttagcagtaaatgaaaat
gagtattttactgagctgcagttgaaagaagaaatattgtag

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