KEGG   Rattus norvegicus (rat): 291440
Entry
291440            CDS       T01003                                 
Symbol
Cxxc1
Name
(RefSeq) CXXC-type zinc finger protein 1
  KO
K14960  COMPASS component SPP1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    291440 (Cxxc1)
   03036 Chromosome and associated proteins [BR:rno03036]
    291440 (Cxxc1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    291440 (Cxxc1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     291440 (Cxxc1)
    COMPASS/SET1 complex (yeast)
     291440 (Cxxc1)
SSDB
Motif
Pfam: CpG_bind_C zf-CXXC PHD ASH2L-like_WH PHD_5
Other DBs
NCBI-GeneID: 291440
NCBI-ProteinID: NP_001073166
RGD: 1310755
Ensembl: ENSRNOG00000014614
UniProt: A1A5S2
Position
18:70088407..70093786
AA seq 660 aa
MEGDGSDLEPPDAGEDSKSENGENAPIYCICRKPDINCFMIGCDNCNEWFHGDCIRITEK
MAKAIREWYCRECREKDPKLEIRYRHKKCRERDGSERDGSEPRDEGGGRKRPASDPELQR
RAGSGTGVGAMLARGSASPHKSSPQPLVATPSQHHQQQQQQQQQQQIKRSARMCGECEAC
RRTEDCGHCDFCRDMKKFGGPNKIRQKCRLRQCQLRARESYKYFPSSLSPVTPSEALPRP
RRPPPTQQQPQQSQKLGRIREDEGTVLSSVVKEPPEATATPEPLSDEDLALDPDLYQDFC
AGAFDDHVPWMSDAEESPFLDPALRKRAVKVKHVKRREKKSEKKKEERYKRHRQKQKHKD
KWKHPERADAKDPASLPQCLGPGCVRAAQPGSKYCSDDCGMKLAANRIYEILPQRIQQWQ
QSPCIAEEHGKKLLERIRREQQSARTRLQEMERRFHELEAIILRAKQQAVREDEENNEND
SDDTDLQIFCVSCGHPINPRVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNP
QSKTYCKRLQVLCPEHSRDPKVPADEVCGCPLVRDVFELTGDFCRLPKRQCNRHYCWEKL
RRAEVDLERVRVWYKLDELFEQERNVRTAMTNRAGLLALMLHQTIQHDPLTTDLRSSADR
NT seq 1983 nt   +upstreamnt  +downstreamnt
atggaaggagatggctcagacctggaacctccagatgctggggaggacagcaagtctgag
aatggggagaacgcccccatctactgcatctgtcgcaaaccggacatcaattgcttcatg
attggatgtgacaactgcaacgagtggtttcatggggactgcatccgcatcaccgagaag
atggccaaggccatccgggaatggtactgtcgcgagtgccgagagaaggacccgaagctg
gagattcgttaccgccacaaaaagtgccgggagagggatggcagtgagcgggacggcagt
gagccccgggatgagggaggagggcgcaagaggcctgcttcagatccagaactgcagcgc
cgggcagggtcagggacaggggttggggccatgcttgctcggggctctgcttcgccccac
aaatcttctccacagcccttggtggccacacctagccagcatcaccagcaacagcagcag
cagcagcagcagcagcaaatcaaacggtcagctcggatgtgtggtgagtgtgaggcatgc
cgacgcactgaggactgtggccactgtgacttctgtcgtgacatgaagaagtttgggggc
cccaacaagatccggcagaagtgccggcttcgccagtgtcagctgcgggcacgggaatcg
tacaagtacttcccttcctcgctctcgccggtgacaccctcagaggccctgccaaggccc
cgccggccaccacccactcaacagcagccacagcaatcccagaagctggggcgtatccgt
gaagatgaggggacagtgttgtcatcagtggttaaggagccaccagaggctacagcaaca
cctgagccactctcagatgaggacctagcactggaccctgatctgtaccaggatttctgt
gctggggcctttgatgatcacgtaccatggatgagtgacgcagaagagtccccgttcctg
gatcctgcactgaggaagcgggcagtaaaagtgaagcatgtgaagcgtcgagagaagaag
tctgagaagaagaaggaggagagatacaaacggcaccgacagaagcagaaacataaagac
aagtggaaacacccagagagggccgatgccaaggaccctgcatctctaccgcagtgcctg
ggacctggctgtgtgcgcgccgcccagcctgggtccaagtattgttcagatgactgtggc
atgaagctggcagccaaccgaatctatgagatcctcccccagcgaatccagcaatggcag
caaagcccctgcatcgccgaagagcacggcaagaagctccttgaacggatccgccgtgag
cagcagagtgcccgcacccgccttcaggaaatggagcgcagattccacgagcttgaggcc
atcatccttcgtgctaagcagcaagctgtgcgagaggacgaggagaacaatgagaatgac
agcgatgacaccgatctgcagatcttctgtgtctcctgtgggcatcccatcaacccccga
gttgccttgcgtcacatggagcgctgctatgctaagtatgagagccagacatcctttggg
tccatgtaccccacacgcattgagggggctacccgactcttctgtgatgtctacaatcct
cagagcaaaacatactgtaagaggctccaggtgctatgtcctgagcactcacgggacccc
aaagtgccagctgatgaggtctgtgggtgtccacttgtacgcgatgtctttgagcttaca
ggtgacttctgccgcctgcccaagcgccagtgtaatcgccattactgctgggagaagctt
cggcgagcagaagtggacttggagcgcgtgcgggtgtggtacaagctggacgagctgttt
gagcaggaacgtaatgttcgcacagccatgaccaacagagcaggattgcttgccctgatg
ctgcaccaaaccatccaacacgatccacttactaccgaccttcgctctagtgctgaccgc
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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