KEGG   Rattus norvegicus (rat): 29146
Entry
29146             CDS       T01003                                 
Symbol
Jag1
Name
(RefSeq) protein jagged-1 precursor
  KO
K06052  jagged-1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno01522  Endocrine resistance
rno04330  Notch signaling pathway
rno04371  Apelin signaling pathway
rno04658  Th1 and Th2 cell differentiation
rno04668  TNF signaling pathway
rno05165  Human papillomavirus infection
rno05200  Pathways in cancer
rno05207  Chemical carcinogenesis - receptor activation
rno05224  Breast cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    29146 (Jag1)
   04371 Apelin signaling pathway
    29146 (Jag1)
   04668 TNF signaling pathway
    29146 (Jag1)
 09150 Organismal Systems
  09151 Immune system
   04658 Th1 and Th2 cell differentiation
    29146 (Jag1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    29146 (Jag1)
   05207 Chemical carcinogenesis - receptor activation
    29146 (Jag1)
  09162 Cancer: specific types
   05224 Breast cancer
    29146 (Jag1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    29146 (Jag1)
  09176 Drug resistance: antineoplastic
   01522 Endocrine resistance
    29146 (Jag1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:rno04090]
    29146 (Jag1)
CD molecules [BR:rno04090]
 Proteins
  29146 (Jag1)
SSDB
Motif
Pfam: EGF MNNL hEGF DL-JAG_EGF-like EGF_2 DSL JAG1-like_EGF2 EGF_CA EGF_3 cEGF DUF6479
Other DBs
NCBI-GeneID: 29146
NCBI-ProteinID: NP_062020
RGD: 2937
Ensembl: ENSRNOG00000007443
UniProt: Q63722
Structure
Position
3:complement(144859453..144894883)
AA seq 1219 aa
MRSPRTRGRPGRPLSLLLALLCALRAKVCGASGQFELEILSMQNVNGELQNGNCCGGARN
PGDRKCTRDECDTYFKVCLKEYQSRVTAGGPCSFGSGSTPVIGGNTFNLKASRGNDRNRI
VLPFSFAWPRSYTLLVEAWDSSNDTIQPDSIIEKASHSGMINPSRQWQTLKQNTGIAHFE
YQIRVTCDDHYYGFGCNKFCRPRDDFFGHYACDQNGNKTCMEGWMGPECNKAICRQGCSP
KHGSCKLPGDCRCQYGWQGLYCDKCIPHPGCVHGTCNEPWQCLCETNWGGQLCDKDLNYC
GTHQPCLNRGTCSNTGPDKYQCSCPEGYSGPNCEIAEHACLSDPCHNRGSCKETSSGFEC
ECSPGWTGPTCSTNIDDCSPNNCSHGGTCQDLVNGFKCVCPPQWTGKTCQLDANECEAKP
CVNARSCKNLIASYYCDCLPGWMGQNCDININDCLGQCQNDASCRDLVNGYRCICPPGYA
GDHCERDIDECASNPCLNGGHCQNEINRFQCLCPTGFSGNLCQLDIDYCEPNPCQNGAQC
YNRASDYFCKCPEDYEGKNCSHLKDHCRTTPCEVIDSCTVAMASNDTPEGVRYISSNVCG
PHGKCKSESGGKFTCDCNKGFTGTYCHENINDCEGNPCTNGGTCIDGVNSYKCICSDGWE
GAHCENNINDCSQNPCHYGGTCRDLVNDFYCDCKNGWKGKTCHSRDSQCDEATCNNGGTC
YDEVDTFKCMCPGGWEGTTCNIARNSSCLPNPCHNGGTCVVNGDSFTCVCKEGWEGPICT
QNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCAFGATCVDEIN
GYQCICPPGHSGAKCHEVSGRSCITMGRVILDGAKWDDDCNTCQCLNGRVACSKVWCGPR
PCQLHKGHGECPNGQSCIPVLDDQCFVRPCTGAGECRSSSLQPVKTKCTSDSYYQDNCAN
ITFTFNKEMMSPGLTTEHICSELRNLNILKNVSAEYSIYIACEPSLSANNEIHVAISAED
IRDDGNPVKEITDKIIDLVSKRDGNSSLIAAVAEVRVQRRPLKNRTDFLVPLLSSVLTVA
WVCCLVTAFYWCVRKRRRKPSSHTHSAPEDNTTNNVREQLNQIKNPIEKHGANTVPIKDY
ENKNSKMSKIRTHNSEVEEDDMDKHQQKVRFAKQPVYTLVDREEKAPSGTPTKHPNWTNK
QDNRDLESAQSLNRMEYIV
NT seq 3660 nt   +upstreamnt  +downstreamnt
atgcggtccccacggacgcgcggccggccggggcgccccttgagccttctgctcgccctg
ctctgtgccctgcgagccaaggtgtgcggggcctcgggtcaatttgagctggagatcctg
tccatgcagaacgtgaacggagagttacagaatgggaactgttgcggcggagcccggaac
cctggcgaccgcaagtgcacccgcgacgagtgtgacacgtacttcaaagtgtgcctcaag
gagtatcagtcccgcgtcacggccgggggaccctgcagcttcggctcagggtctacgcct
gtcatcgggggcaataccttcaatctcaaggccagccgcggcaacgaccgtaatcgcatc
gtactgcctttcagtttcgcctggccgaggtcctacactttgctggtggaggcatgggat
tccagtaatgacactattcaacctgatagcataattgaaaaggcttctcactcaggcatg
ataaaccccagccggcagtggcagacactgaaacagaacacagggattgcccactttgag
tatcagatccgagtgacctgtgatgaccactactatggctttggctgcaacaagttctgt
cggcccagagatgacttctttggacattatgcctgcgaccagaatggcaacaaaacctgc
atggaaggctggatgggtcctgagtgtaacaaagcaatatgccgacagggctgcagtccc
aagcatggctcctgcaaactcccaggtgactgcaggtgccagtatggttggcagggcctg
tactgtgataagtgcatcccgcacccaggatgtgtccacggcacctgcaatgaaccctgg
cagtgcctctgtgaaaccaactggggtggacagctctgtgacaaagatctgaattactgt
gggactcatcagccctgtctcaaccggggaacatgtagcaacactggccctgacaaatac
cagtgttcctgccccgagggctactcaggaccgaactgtgaaattgctgagcatgcctgc
ctctctgatccctgccacaacagaggcagctgcaaggagacctcctcgggctttgagtgt
gagtgttctccaggctggactggacccacgtgttccacaaacatcgatgactgttctcca
aataactgttcccatggaggcacctgccaggatctagtgaatggattcaagtgcgtgtgc
ccaccccagtggactggcaagacttgtcagttagatgcaaatgagtgcgaggccaagcct
tgtgtaaatgccagatcctgtaagaatctgattgccagctactactgtgattgtcttcct
ggctggatgggtcagaattgtgacataaatatcaatgactgccttggccagtgtcagaat
gatgcctcctgtcgggatttggttaatggttatcgctgtatctgtccacctggctatgcg
ggcgatcactgtgaaagagacatcgatgaatgtgctagcaacccctgcttgaatgggggt
cactgtcagaatgaaattaacagattccagtgtctgtgtcccactggtttctctggaaac
ctctgtcagctggacatcgattactgcgagcccaacccttgccagaatggcgcccaatgc
tacaatcgtgccagtgactatttctgcaagtgccctgaggactacgagggcaagaactgc
tcacacctgaaagaccactgccgcaccactccctgtgaagtgattgacagctgcaccgtg
gccatggcctccaacgatacgcctgaaggggtgcggtatatctcttccaacgtctgtggt
ccccatgggaagtgcaagagcgagtcaggaggcaaattcacctgtgactgtaacaaaggc
ttcaccggcacctactgccatgaaaatatcaacgactgtgagggcaacccctgtacgaac
ggtggcacgtgcatcgacggcgtcaactcctacaagtgtatctgtagtgacggctgggag
ggcgcgcactgtgagaacaacataaatgactgtagccagaacccttgccactatgggggt
acatgtcgagacctggtcaatgacttttactgtgactgcaaaaatgggtggaaagggaaa
acctgccactcgcgtgacagccagtgtgacgaagccacgtgtaataacggtggtacctgc
tatgatgaagtggatacgtttaagtgcatgtgtcctggtggctgggaaggaacaacctgt
aatatagctagaaacagtagctgcctgccgaacccctgtcataatggaggcacctgcgtg
gtcaatggagactccttcacctgtgtctgcaaagaaggctgggaggggccgatttgtact
caaaataccaacgactgcagtcctcacccttgttacaacagcggaacctgtgtggatgga
gataactggtaccggtgcgaatgtgcccctggttttgctgggccagactgcaggataaac
atcaatgagtgtcagtcttccccttgtgcctttggggccacctgtgtggatgagatcaat
ggctaccagtgtatctgccctccaggacatagtggtgccaagtgccatgaagtttcaggg
agatcttgcatcaccatggggagagtgatacttgatggggccaagtgggatgacgactgt
aacacctgccagtgcctgaatggacgggtggcctgctccaaggtctggtgtggcccgaga
ccttgccagctccacaaagggcacggcgagtgtcccaatgggcagagctgcatcccagtc
ctggatgaccagtgtttcgtgcgcccctgcactggtgctggcgagtgtcggtcctccagc
ctccagccagtgaagaccaagtgtacatcggactcttattaccaggacaattgtgcgaac
atcactttcacctttaacaaggagatgatgtctccaggtctcaccactgagcacatttgc
agcgaattgaggaatctgaatattctgaagaatgtttctgctgagtattcaatctacata
gcctgtgagccttccttatcagcaaacaatgaaatacacgtggccatttctgccgaagac
atccgggatgatggaaaccctgtcaaggaaattactgataaaataatagatctcgttagt
aaacgggatgggaacagctcacttatcgctgctgttgcagaagtcagagttcagaggcgc
cctctgaaaaacagaacagatttcctggttcctctgctgagctctgtcttaacagtggct
tgggtctgttgcttggtgacagccttctactggtgtgtgcggaagcggcggcggaagccc
agcagccacacccactctgcccctgaggacaacaccaccaacaatgtgcgcgaacagctg
aaccaaatcaaaaaccccatcgagaaacacggagccaacacagtccccatcaaggattat
gagaacaaaaactccaaaatgtcaaaaatcaggacacacaactcggaagtggaagaggat
gatatggataagcaccagcagaaagtccggtttgccaaacagcccgtgtacacgctggta
gacagagaggagaaggcccccagcggcacgccgacaaaacacccgaactggacaaacaaa
caggacaacagagacttggaaagtgcccagagcttgaaccggatggagtacatcgtatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (9)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (11)   
   Pfam (11)   
All databases (36)   

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