KEGG   Rattus norvegicus (rat): 29150
Entry
29150             CDS       T01003                                 
Symbol
Matr3
Name
(RefSeq) matrin-3
  KO
K13213  matrin 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    29150 (Matr3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    29150 (Matr3)
Spliceosome [BR:rno03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    29150 (Matr3)
SSDB
Motif
Pfam: RRM_1 RRM_5 zf-C2H2_jaz Utp14
Other DBs
NCBI-GeneID: 29150
NCBI-ProteinID: NP_062022
RGD: 3052
Ensembl: ENSRNOG00000019875
UniProt: P43244 A0A0G2JSR7 A6J2X6
Position
18:27428190..27474421
AA seq 845 aa
MSKSFQQSSLGRDSQGHGRDLSAAGIGLLAAATQSLSMPASLGRMNQGTARLASLMNLGM
SSSLNQQGAHSALSSASTSSHNLQSIFNIGSRGPLPLSSQHRGDTDQASNILASFGLSAR
DLDELSRYPEDKITPENLPQILLQLKRRRTEEGPTLSYGRDGRSATREPPYRVPRDDWEE
KRHFRRDSFDDRGPSLNPVLDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDDSFFGETS
HNYHKFDSEYERMGRGPGPLQERSLFEKKRGAPPSSNIEDFHGLLPKGYPHLCSICDLPV
HSNKEWSQHINGASHSRRCQLLLEIYPEWNPDNDTGHTMGDPFMLQQSTNPAPGILGPPP
PSFHLGGPAVGPRGNLGAGNGNLQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVE
PFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKYKRIKKP
EGKPDQKFDQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEME
TREDAMAMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRKRSYSPD
GKESPSDKKSKTDGAQKTENPAEGKEQEEKSGEDGEKDTKDDQTEQEPSMLLESEDELLV
DEEEAAALLESGSSVGDETDLANLGDVSSDGKKEPSDKAVKKDASATSKKKLKKVDKIEE
LDQENEAALENGIKNEENTEPGAESAENADDPNKDASDNSDGQNDENKEDYTIPDEYRIG
PYQPNVPVGIDYVIPKTGFYCKLCSLFYTNEEVAKNTHCSSLPHYQKLKKFLNKLAEERR
QKKET
NT seq 2538 nt   +upstreamnt  +downstreamnt
atgtccaagtcattccagcagtcatctctcggtagggattcacagggtcatgggcgtgac
ctgtctgcagcaggaataggccttcttgctgctgctacccagtctttaagtatgccagca
tctcttggaaggatgaaccagggtactgcacgccttgctagcttaatgaatcttggaatg
agttcttcattgaatcaacaaggagctcatagtgcactgtcttctgctagtacttcttcc
cataatttgcagtctatatttaacattggaagtagaggtccactccctttgtcttctcaa
caccgtggagatacagaccaggccagtaatattttggccagctttggtctgtctgctaga
gacttagatgaactgagtcgttatccagaggacaagattactcctgagaacttgccccaa
attcttctacagcttaaaaggaggagaactgaagaaggccctacattgagttatggtaga
gatggcagatctgctacacgggagccaccatacagagtacctagggatgattgggaagaa
aaaaggcattttagaagagatagttttgatgatcgtggtcctagtctcaacccagtgctt
gattatgaccatggaagtcgttctcaagaatctggttattatgacagaatggattatgaa
gatgacagattaagagatggagaaaggtgtagggatgattctttttttggtgagacctcg
cataactatcataaatttgacagtgagtatgagagaatgggacgtggtcctggcccctta
caagagagatctctctttgagaaaaagaggggcgctcctccaagtagcaatattgaagac
ttccatggactcttaccgaagggttatccccatctgtgctctatatgtgatttgccagtt
cattctaataaggagtggagtcaacatatcaatggagcaagtcacagtcgtcgatgccag
cttcttcttgaaatctacccagaatggaatcctgacaatgatactggacacacaatgggt
gatccattcatgctgcagcagtcaacaaacccagcaccgggaattctgggaccgccacct
ccttcatttcatcttggaggaccagcagttggaccaagaggaaatctgggtgctggtaat
gggaacctacagggaccaagacacatgcaaaaaggcagagtggaaaccagccgagttgtt
cacattatggattttcagcgaggaaaaaacttgagataccagctattacaactggtagaa
ccatttggagtcatttcaaatcatctgattctaaataaaattaatgaggcatttattgaa
atggcgaccacagaagatgctcaggctgctgtggattattatacaactacaccagcatta
gtgtttggcaagccagtgagagttcatttatcccagaagtataagagaataaagaaacct
gaaggaaaaccagatcagaagtttgatcaaaagcaagaacttggacgtgtgatacatctc
agcaatttacctcattctggctattctgacagtgctgtcctcaagcttgcagagccttat
gggaaaataaaaaattatatattgatgaggatgaaaagtcaggcttttattgagatggaa
accagagaagatgcaatggcaatggttgaccactgtctaaagaaggcactttggtttcag
ggaagatgtgttaaagttgacttgtctgagaaatataaaaaactggtgctgaggattcct
aacagaggcattgacttactgaaaaaagataaatctcggaaaagatcctattctccagat
ggaaaagaatctccaagtgataagaagtccaaaactgatggtgctcagaagactgagaat
ccagctgagggtaaagaacaagaagagaagtcgggtgaggatggtgagaaagacaccaag
gatgaccagacagaacaggagcccagtatgcttcttgaatctgaagatgaattgcttgtc
gatgaggaagaagctgcagcactactagaaagtggaagctcagtgggtgatgagactgat
cttgctaatttaggggatgtatcttctgatgggaaaaaggagccttcagataaagctgtg
aaaaaagatgcaagtgcaacatccaagaaaaaacttaaaaaggtggacaagattgaggaa
cttgatcaagaaaatgaagctgcattggaaaatgggattaaaaatgaggaaaatacagaa
ccaggtgctgaatctgctgagaatgctgatgatccaaacaaagacgcaagtgataattca
gatggccaaaatgatgagaacaaggaggactatacaattccagatgagtatagaattgga
ccatatcagcctaatgttcctgttggtatagactatgtgatacctaaaacagggttttac
tgtaagctgtgttcactcttttatacaaatgaagaagttgcaaagaatactcattgcagc
agccttcctcattatcagaaattaaagaaatttctgaataaattggcagaagaacggagg
cagaagaaggaaacttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (21)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (17)   
DNA sequence (43)   
   RefSeq(nuc) (17)   
   GenBank (13)   
   EMBL (13)   
Protein domain (4)   
   Pfam (4)   
All databases (78)   

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