KEGG   Rattus norvegicus (rat): 29155
Entry
29155             CDS       T01003                                 
Symbol
Capn3
Name
(RefSeq) calpain-3
  KO
K08573  calpain-3 [EC:3.4.22.54]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    29155 (Capn3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    29155 (Capn3)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.54  calpain-3
     29155 (Capn3)
Peptidases and inhibitors [BR:rno01002]
 Cysteine peptidases
  Family C2: calpain family
   29155 (Capn3)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III Calpain_u2 EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 EF-hand_5
Other DBs
NCBI-GeneID: 29155
NCBI-ProteinID: NP_058813
RGD: 2269
Ensembl: ENSRNOG00000008609
UniProt: P16259
Position
3:127860002..127913677
AA seq 821 aa
MPTVISPTVAPRTGAEPRSPGPVPHPAQGKTTEAGGGHPGGIYSAIISRNFPIIGVKEKT
FEQLHKKCLEKKVLYLDPEFPPDETSLFYSQKFPIQFVWKRPPEICENPRFIIGGANRTD
ICQGDLGDCWFLAAIACLTLNERLLFRVIPHDQSFTENYAGIFHFQFWRYGDWVDVVIDD
CLPTYNNQLVFTKSNHRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFE
IKDAPSDMYKIMRKAIERGSLMGCSIDDGTNMTYGTSPSGLNMGELIARMVRNMDNSLLR
DSDLDPRASDDRPSRTIVPVQYETRMACGLVKGHAYSVTGLEEALFKGEKVKLVRLRNPW
GQVEWNGSWSDGWKDWSFVDKDEKARLQHQVTEDGEFWMSYDDFVYHFTKLEICNLTADA
LESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEEDDDPDDSEVICSF
LVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMHGNKQHLQKDFFLYNASKARSKTYINM
REVSQRFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEAENTISVDRPVKKKKNK
PIIFVSDRANSNKELGVDQEAEEGKDKTGPDKQGESPQPRPGHTDQESEEQQQFRNIFRQ
IAGDDMEICADELKNVLNTVVNKHKDLKTQGFTLESCRSMIALMDTDGSGRLNLQEFHHL
WKKIKAWQKIFKHYDTDHSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNIDFD
SFICCFVRLEGMFRAFHAFDKDGDGIIKLNVLEWLQLTMYA
NT seq 2466 nt   +upstreamnt  +downstreamnt
atgccgaccgttattagtccaactgtggccccaaggacaggagctgagcccaggtcccca
gggccagttcctcacccagctcaaggcaagaccactgaggctggaggtggacacccgggt
ggcatctattcagccatcatcagccgcaattttccgatcattggtgtgaaagagaagaca
ttcgagcagctccacaagaagtgcctagagaagaaagttctttacctggatcccgagttc
ccaccggatgagacctctctcttttacagccagaagttccccatccagttcgtctggaag
agacctccggaaatttgtgagaatccccgatttatcattggtggagccaacaggactgac
atctgccaaggagatctaggggactgctggtttcttgcagccattgcctgtctgaccctg
aatgagcgactgcttttccgagttatacctcatgatcaaagtttcactgaaaactacgca
gggatcttccacttccagttctggcgctatggagactgggtagatgtggttattgacgac
tgtctgccgacatacaacaaccagctggtcttcaccaaatccaaccaccgcaatgagttc
tggagtgctctactggagaaagcatatgccaagctccatggttcctatgaagctctgaaa
ggtgggaacaccacagaagccatggaggacttcacaggaggggtgacagagttttttgag
atcaaggatgctccgagtgacatgtacaagatcatgaggaaagctatcgagagaggctcc
ctcatgggctgctccattgatgatggcaccaacatgacttatggaacctctccttctggt
ctgaacatgggggaattgattgcgcggatggtgagaaatatggataactcgctgctcaga
gactcagacctggaccccagggcctcagatgacagaccgtcacggacaattgttccggtg
cagtatgaaacaagaatggcctgtggactggtgaaagggcacgcctattcagtcactggg
ctggaggaggccctgttcaaaggcgagaaggtgaagctggtgcggctgcggaacccctgg
ggccaggtggagtggaacggctcttggagtgatggttggaaggactggagctttgtggac
aaagacgagaaggcccgtctgcagcaccaggtcaccgaggatggagagttctggatgtca
tatgatgactttgtctaccatttcacaaagctggagatctgcaacctcacagctgatgcc
ctggagtccgataagcttcagacctggacagtgtctgtaaatgagggccgctgggtgagg
ggctgttctgctggaggctgccggaacttcccagacactttctggaccaacccgcagtac
cgtctcaagctcctggaggaggatgatgaccctgatgactctgaggtgatttgcagcttc
ctcgtggctctgatgcagaaaaatcggcgcaaggaccggaagctgggggccaacctcttc
accattggcttcgctatctacgaggttcccaaagagatgcacgggaataagcaacacctg
cagaaggacttcttcttgtacaatgcctccaaggccaggagcaaaacctacatcaacatg
cgggaggtgtcccagcgcttccgcctgccgcccagcgagtatgtcattgtcccctccact
tacgagccccatcaggagggggaattcatcctccgggtcttctctgaaaagaggaatctc
tctgaggaagctgagaatacaatctctgtggaccggccagtgaaaaagaaaaaaaacaag
cccatcatcttcgtttcagacagagcaaacagcaacaaggagctgggtgtggaccaggag
gcagaggagggcaaagacaaaacagggccggataaacaaggggaaagcccacagccacgg
cctggccacacagaccaggagagtgaggagcagcagcaattccggaacatcttcaggcag
attgcaggcgacgacatggagatctgtgcggatgaactcaagaatgtccttaatacggtg
gtgaacaaacacaaggacctgaagacacaagggttcactctggagtcctgcagaagcatg
atagctctcatggatacagatggctctgggagactgaatcttcaagagttccatcacctc
tggaaaaagatcaaggcctggcagaaaatcttcaaacactatgacactgaccattctggt
accatcaatagctatgagatgcgaaatgcagtcaatgatgcaggcttccatctcaacagc
caactctatgacatcatcaccatgcgctacgcagacaaacacatgaacatcgactttgac
agcttcatctgctgcttcgtcaggctggaagggatgttcagagcttttcacgcatttgac
aaggatggagatggcatcatcaaactgaacgtacttgagtggctgcagcttaccatgtat
gcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (18)   
   RefSeq(nuc) (6)   
   GenBank (6)   
   EMBL (6)   
Protein domain (8)   
   Pfam (8)   
All databases (46)   

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