KEGG   Rattus norvegicus (rat): 291567
Entry
291567            CDS       T01003                                 
Symbol
Ppargc1b
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-beta
  KO
K17962  peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04931  Insulin resistance
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09167 Endocrine and metabolic disease
   04931 Insulin resistance
    291567 (Ppargc1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:rno03029]
    291567 (Ppargc1b)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Coactivators
    291567 (Ppargc1b)
SSDB
Motif
Pfam: RRM_1 Spore_coat_CotO
Other DBs
NCBI-GeneID: 291567
NCBI-ProteinID: NP_788264
RGD: 727948
Ensembl: ENSRNOG00000017503
UniProt: Q811R2
Position
18:complement(57029264..57131466)
AA seq 1010 aa
MAGNDCGALLDEELSSFFLNYLSDTQGGESGEEQLCADLPELDLSQLDASDFDSATCFGE
LQWCPETSETEPSQYSPDDSEFFQIDSENEALLAALTKTLDDIPEDDVGLAAFPGLDEGD
TPSCTPASPAPLSVPPSPALERLLSPVSEVDELSLLQKLLLATSSPTASSDALKDGATWS
QTSLSSRSQRPCVKVDGTQDKKTPMLRSQSRPCTELHKHLTSVLPCPRGKACSPPPHPSP
QLLSKEDEEVGEDCPSPWPAPASPQDSLGQDTANPNSAQVPKDDVRAMVQLIRYMHTYCL
PQRKLPQRASEPIPQSCSSPLRKVPPRSRQTPKAFWTEFSILRELLAQDILCDVSKPYRL
ATPVYASLTPQSRTRPPKDSQASPAHSAMAEEVRITASPKSTGPRPSLRPLRLEVKRDVN
KPARQKREEDEEEEEEEEEEEEKEDEEEEWGRKRPGRGLPWTKLGRKMDSSVCPVRRSRR
LNPELGPWLTFTDEPLGALPSMCLATETHDLEEELGGLTDSSQGQQLPLGSQIPTLESPC
ESGCGDTDEDPSCPRPPSRDSPRCLMLALSQSDPLGKKSFEESLTVELCGTAGLTPPTTP
PYKPMEEDPFKQDTKHSPGQDTAPSLPSPETLQLTATPGASHKLPKRHPERSELLSHLQH
ATTQPVSQAGQKRPFSCSFGDHDYCQVIRPEAALQRKVLRSWEPIKVHLEDLAHQGATLP
VETKTPRREADQNCDPTPKDSMQLRDHEIRASLTKHFGLLETALEEEDLASCKSPEYDTV
FEDSSSSSGESSFLLEEEEEEGGEEDDEGEDSGVSPPCSDHCPYQSPPSKASRQLCSRSR
SSSGSSSCSSWSPATRKNFRLESRGPCSDGTPSARHAKKRREKAIGEGRVVYIRNLSGDM
SSRELKKRFEVFGEIVECQVLRRSKRGQKHGFITFRCSEHAALSVRNGATLRKRNEPSFH
LSYGGLRHFRWPRYTDYDPTSEESLPSSGKSKYEAMDFDSLLKEAQQSLH
NT seq 3033 nt   +upstreamnt  +downstreamnt
atggcggggaacgactgcggcgcgctgctggatgaagagctctcgtccttcttcctcaac
tatctctctgacacgcagggtggggagtctggagaggaacagttatgtgctgacttgcca
gagctcgacctctcccagctggatgccagtgacttcgactcagccacgtgctttggggag
ctgcagtggtgcccagagacctcagagacagagcccagccagtatagccctgatgattcc
gagttcttccagattgacagtgagaatgaagctctcttggctgcgcttaccaagaccctg
gatgacatccccgaagacgatgtggggctggctgccttcccaggactggatgaaggcgac
acaccctcctgcaccccagcttcacctgctcctttatctgtgccccccagccccgccttg
gagaggcttctgtccccagtgtctgaagtggatgagctttcactgctgcagaagctcctc
ctggccacatcctccccaacagcaagctctgatgctctgaaggacggggccacctggtcg
cagaccagcctcagttccagaagtcagcggccttgtgtcaaggtggatggcacccaggac
aagaagacccccatgctacggtctcagagccggccttgtacagaactgcataagcacctc
acttcggtgctgccctgccccaggggaaaagcctgttccccacctccccacccaagtcct
cagctcctctccaaagaggatgaggaggtgggagaggattgcccaagcccctggccagct
ccagcgtctccccaagactcactaggacaggacacggccaaccccaacagtgcccaagtt
cccaaggacgacgtgagggccatggtacagctcattcgctacatgcatacctactgcctg
cctcagaggaagctgccccaacgggcctcagagccaatcccccagtcctgcagcagcccc
ttgaggaaggtcccaccccgatcccggcaaacccccaaagccttctggactgagttctcc
atcctaagggaacttctggcccaagatatcctctgtgatgttagcaagccctaccgcctg
gccacacctgtctatgcttctctcacaccccagtccagaaccaggccccccaaagacagt
caggcctcccctgcccactctgccatggcagaagaggtgagaatcactgcttcccccaag
agcactggacctagacccagcctccgtcctctgaggctagaggtgaaacgggatgtcaac
aagcctgcaaggcaaaagcgggaggaagatgaggaggaggaagaggaagaagaagaggaa
gaagaaaaagaggatgaagaagaggagtggggcaggaagagaccaggtcgtggcctgcca
tggaccaaactagggaggaagatggacagctctgtgtgccctgtgcggcgctccaggaga
ctgaatccagagctgggcccttggctgacattcactgatgagcccctaggtgctctaccc
tcgatgtgcctggctacagagacccacgacctggaagaagagctgggcggcctcacagac
agtagtcaaggccagcagctccccctgggatcccagatccccaccctggaaagcccctgt
gaaagtgggtgtggggacacagatgaagatccaagctgcccgcggcccccttccagagac
tcccccaggtgcctcatgctggccttgtcacaaagtgaccctcttggcaagaagagcttt
gaggagtccttgacagtggagctttgtggcacagcaggactcactccacccaccacacct
ccatataagcccatggaggaggaccccttcaagcaggacaccaagcacagcccaggccaa
gacacagctcccagcctcccttcccctgagactcttcagctcacagccaccccaggggct
tcccacaagctgcccaagaggcacccggagcgaagtgagctcctgtctcatctgcaacat
gccacaacccagccagtctcacaggctggccagaagcgtcccttctcctgctcctttgga
gaccatgactactgccaggtgatcaggccagaggctgccctgcagaggaaggtgctgcgg
tcctgggagccaatcaaggtccaccttgaagacttggcccaccagggtgcaaccctgcca
gtggaaacaaagacccctaggagggaggcagaccagaactgtgaccccacccccaaggac
agcatgcagctaagagaccatgagatccgtgccagcctcacaaagcactttgggctgctg
gaaaccgctctggaggaggaagacttggcttcatgtaaaagcccggagtatgacaccgta
tttgaggacagcagcagcagcagtggcgagagcagcttcctgctagaggaggaggaagag
gagggaggggaagaggacgatgaaggagaggactcaggggtcagccctccctgctccgac
cactgcccctaccagagcccacccagtaaggccagtcggcagctctgttcccgaagccgc
tccagttctggctcctcatcctgtagctcctggtcaccagctacccggaagaacttcaga
cttgagagcagagggccctgttcagatggaaccccaagcgcccggcatgccaagaagcgg
cgggaaaaggccatcggtgaaggtcgtgtggtatacatccgaaatctctccggtgacatg
agctctcgggaactaaagaagcgcttcgaggtgtttggtgagatagtcgagtgccaggtg
ctgaggagaagtaagagaggccagaagcacggttttattaccttccggtgttcggagcat
gccgccctgtccgtgaggaacggcgctaccctgagaaaacgcaatgagccctccttccac
ctgagctatggagggctccggcacttccgctggcccagatacaccgactatgatcccacg
tctgaagagtcccttccctcgtctgggaaaagcaagtacgaagccatggattttgacagc
ttactgaaagaggcccagcagagcctgcattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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