KEGG   Rattus norvegicus (rat): 291683
Entry
291683            CDS       T01003                                 
Symbol
Pkd2l2
Name
(RefSeq) polycystic kidney disease 2-like 2 protein
  KO
K04991  polycystin 2L2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    291683 (Pkd2l2)
Ion channels [BR:rno04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   291683 (Pkd2l2)
SSDB
Motif
Pfam: PKD_channel Polycystin_dom Ion_trans gp37_trimer
Other DBs
NCBI-GeneID: 291683
NCBI-ProteinID: NP_001099626
RGD: 1310272
Ensembl: ENSRNOG00000025489
UniProt: D4A828 A6J2U3
Position
18:26281719..26316583
AA seq 621 aa
MSEATWWHRGGTSKHDLHYRREAEVNTTLEELLLYFIFLINLCILTFGTVNPHMYYLNKV
MSSLFVDTSLPDDERSSFRSIRSITEFWKFMEGPLVEGLYWDSWYGNTQLDSVKNSSLIY
YENILLGVPRVRQLRVRNSTCQVYPAFQSLASDCYNKYTAENEDFSDFGLKHDPEWRHSA
PSSTAPWHWGFVGVYRDGGYMVTLSKSKSETKAKLADLRQNNWIGRGTRAVFIDFSLYNA
NVNLFCIIRLLAEFPATGGILTSWQFYSVKLIRYVSYYDHFIASCEIIFCIFLLVFITQE
LRKLNEFKSAYFRSVWNWIELLLLVLCFLAVSFYAYCNVQCFLLLGQLLRSTESYPDFYF
LAYWHIYYNNIIAITIFFAWIKIFKFISFNETMSQLSSTLSRCMKDIVGFAIMFFIIFFA
YAQLAFLVFGSQVDDFSTFQNSIFAQFRIVLGDFNFAGIQQANWILGPIYFITFIFFVFF
VLLNMFLAIINDTYSEVKADYSIGRRPDFELGSIIKKSCFNILEKLRLRKAQNNEDKKMK
TSVDLAQARKEGFDESEIQEARQMKRWKERLEKKYYSTEIQDDYQPVTQQEFRELFLYAV
ELEKELHYLSLKLNQVMRKLH
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgtccgaggcgacttggtggcaccgaggagggacttcaaaacatgacctgcattaccga
agggaagcggaggttaacaccacacttgaagagttgttactatactttatttttctaata
aatctatgcatattgacttttgggacggtcaacccacatatgtactacttaaacaaagtc
atgtcatctctgtttgtggacacttctctacctgatgacgaaagaagcagctttaggtcc
attcgcagcataactgagttctggaagttcatggaaggacccctcgtggaaggcttgtac
tgggactcgtggtacggaaacacacagctggacagcgtgaagaacagcagcctcatctac
tacgagaacattctcctcggcgtccccagagtgcggcagctgcgagtccgaaacagcact
tgccaggtctacccagctttccagtccctagccagcgactgttacaacaaatacacagca
gagaatgaggacttctctgattttggcctcaaacatgatccagaatggaggcactcggct
ccttccagcaccgccccatggcactgggggtttgtcggcgtctaccgagatggagggtat
atggtcactttatcaaaatcaaagtctgaaaccaaagccaaactcgctgacctgcggcag
aacaactggatcggcagagggaccagggctgtcttcattgatttttcattgtacaatgct
aacgtcaacctgttttgtatcatcaggctgctggcggagttccctgcgacaggcgggatc
ctcacttcctggcaattctactctgtgaagctcatcagatacgtctcctactacgaccac
ttcattgcctcctgtgaaattatattttgtattttccttttggtcttcataacacaagaa
ctgagaaaactgaatgagtttaagtctgcctatttcagaagtgtctggaactggatagaa
ctgctgcttttggtgctctgtttccttgccgtgtctttctacgcatactgtaacgtacag
tgttttctcttacttggacagctgctgaggagcaccgaaagctatccggacttttacttc
cttgcatattggcacatttactataacaacataattgctatcacgatcttctttgcatgg
ataaagatattcaaattcataagcttcaacgagacgatgtctcagctgtcgtccacgcta
tcccgctgcatgaaggacatcgtgggcttcgccatcatgttcttcatcatcttcttcgcc
tacgcccagttggcgtttctcgtttttgggtcacaggttgatgacttctccacctttcaa
aattccatatttgcacaatttcgaattgtcctcggggactttaactttgctggcatccag
caggccaactggatcttggggcccatctacttcatcaccttcatcttcttcgtattcttc
gtgctcctgaacatgttcttggcaataattaatgatacctattctgaagtgaaggccgat
tattcgataggcagaagaccagattttgaacttggtagcataattaagaagagttgcttc
aatattctggagaaactcagactcaggaaagctcaaaataatgaagacaagaaaatgaaa
accagcgtagacttggcacaagccagaaaagaaggctttgatgaaagtgagatccaagag
gcaaggcagatgaaaaggtggaaggaaaggcttgagaaaaagtattattctaccgaaatt
caagacgactaccagcctgtcactcagcaagaatttcgagaactcttcttatatgcggtg
gagcttgagaaggagctacactacctgagtttaaaactgaaccaagtgatgagaaagcta
cactaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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