KEGG   Rattus norvegicus (rat): 291750
Entry
291750            CDS       T01003                                 
Symbol
Trappc8
Name
(RefSeq) trafficking protein particle complex subunit 8
  KO
K20305  trafficking protein particle complex subunit 8
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    291750 (Trappc8)
Membrane trafficking [BR:rno04131]
 Endosome - Golgi transport
  Tethering complex
   TRAPP complex II
    291750 (Trappc8)
SSDB
Motif
Pfam: TRAPPC-Trs85 SNAP
Other DBs
NCBI-GeneID: 291750
NCBI-ProteinID: NP_001099630
RGD: 1309102
Ensembl: ENSRNOG00000022202
UniProt: A6J2G6
Position
18:complement(12378825..12455364)
AA seq 1433 aa
MAQCVQSVQELIPDSFVPCVAALCSDEAERLTRLNHLSFAELLKPFSRLTSEVHMRDPNN
QLHIIKNLKIAVSNIVTQPPQPGAIGKLLNDVVSGSQPAEGLVANVITAGDYDLNISATT
PWFESYRETFLQSMPASDHEFLNHYLACMLVASSAEAEPMEQFSKLSQEQHRIQHNSDYS
YPKWFIPNTLKYYVLLHDVTSGDEQRAESIYEEMKQKYGTQGCYLLKINSRAPNRASDEQ
IPDPWSQYLQKNSIQNQESYEDGPCTMTSSKNSDSNLLSLDGLDNEVKDGLPDNCRVHPL
QIDQCGDTPHNTDGSDHAKSASSVHETKKASTGLIRGACLTLTDHDRIRQFIQEFTFRGL
LPHVEKTIRQLNDQLISRKGLSRSLFSATKKWFSGSKVPEKSISELKSTSGLLYPPEAPE
LQIRKMADLCFLVQHYDLAYSCYHTAKKDFLNDQAMLYAAGALEMAAVSAFLQPGAPRPY
PAHYMDTAIQTYRDICKNMVLAERCVLLSAEILKSQSKYAEAAALLIRLTSEDSDLRSAL
LLEQAAHCFINMKNPMVRKYAFHMILAGHRFSKAGQKKHALRCYCQAMQVYKGKGWSLAE
DHINFTIGRQSYTLRQLDNAVSAFRHILINESKQSAAQQGAFLREYLYVYKNVNQLSPDG
PLPQLPLPYINSSATRVFFGHDRRPADGEKQAATHVSLDQEYDAESSQQWRELEEHVVAV
ANKGVIPSSFYPTQYCLNSYSDNSRFPLAVVEEPITVEVAFRNPLKVPLLLSDLSLLWKF
QPKDTSGKDTEKERVTGEPEMIGTEVISEFLINSEESKVARLKLFPHHIGELHILGVVYN
LGTIQGSVTVDGIGALPGCHTGKHSLGMSVRGRQDLEIQGPRLNNTKEEKTSVKYGPDRR
LDPIVTEEMPLLEVFFIHFPTGLLCGEIRKAYVEFVNVSQCPLTALKVVSKRPEFFTFGG
NTAALTPLSPSTSENCSAYKTVVTASPSLGTAFVSTASSVDFGTGTGQQLEAIPVPLPDS
VLLPGASVQLPMWLRGPDEEGVHEINFLFYYESVKKQPKKRHRILRHTAVICTSRSLNVR
ATVCRSNSLEDEEGRGGNMLVFVDVENTNTSEAGVKEFHMVQVSSSSKHWQLHRSVNISE
NRDAKLASREKGKFCFKAVRCKQKEGDKQSSEKYTFADIIFGNEQIISSASPCADFFYRS
LSSELRRTQDQLPAYPEKNASEGAVRLIEKCSEVDLSIVVLWKAYVVEDNKQLILEGQHH
VVVRTVGKEACSHSQKQEPPEMELLKFFRPENTTVSARPSVEQLSNLIKTSLHYPESFHH
PFHQKSLCLVPVTLLLSNCSKAEVDVIVDLRHKTTSPEALETHGSFTWLGQTQYKLQLKS
QETHSLQLKACFVHTGVYNLGTPRVFAKLSDQVTVFETSQQNSMPALIIINNA
NT seq 4302 nt   +upstreamnt  +downstreamnt
atggcccagtgcgtgcagtcggtgcaggagctcatccccgactccttcgttccctgcgtc
gccgcgctgtgcagtgacgaagccgagcggctcactcgcctcaaccacctcagctttgcc
gagctgctcaagcccttctctcgcctcacttccgaagttcacatgagagatcctaataat
caactgcatataattaaaaatttgaagatagcagtaagcaacattgtcacccagccacct
cagccgggagccattgggaagcttttgaatgatgttgtttctggcagccagcctgcagaa
ggattagtcgctaatgtgattacagcaggagattatgaccttaatatcagtgctactact
ccatggtttgagtcttacagagagacctttctgcagtccatgccagcatcagatcatgag
tttctgaatcactatttagcatgtatgctggtggcatcatctgctgaagcagaacccatg
gaacagttttcaaagttgtcacaggaacagcatcgaattcagcacaacagtgattattcc
taccctaagtggtttatcccaaatacacttaaatattacgtgcttttgcatgatgtgact
tcaggagatgaacagagagctgaatcaatttatgaagaaatgaaacagaaatatggaact
cagggttgctatttacttaaaattaattctcgagcaccaaatcgagcatcagatgagcag
ataccagatccttggagtcagtatctccagaaaaatagtattcaaaaccaggaatcatat
gaagatggcccttgtactatgacctccagtaagaattctgatagtaacttgctttcattg
gatggactagataacgaagtcaaagatggccttccagataactgcagagttcatccactt
caaatagaccagtgcggtgacactcctcataacaccgatggctcggatcatgcaaagtct
gcttcttcagtacatgagacaaagaaagcaagcactggactgattcgtggtgcctgttta
acacttactgatcatgatagaattcgacagtttatacaagaatttacattccgtggcctt
ttgccacacgtagagaaaacaattcgtcagttaaatgatcagctaatatcaaggaaaggt
ttgagtcgatctctgttttctgccactaagaagtggttcagtggcagtaaagttccagaa
aagagcatcagtgagctgaagagcacgtcggggttgttgtatccaccagaagcacctgag
cttcagatcaggaagatggcggacttgtgctttttggtgcaacactatgatttggcctac
agttgctatcacactgcaaagaaggactttcttaatgatcaagccatgctttatgcagca
ggtgccttggaaatggcagcagtgtcagcctttcttcagcctggagctcccaggccgtac
cctgctcattacatggacacagcaattcagacatatagggatatctgcaagaatatggtg
ctggctgaaagatgtgtgttgcttagtgccgaaattttaaaaagtcaaagcaagtacgca
gaggctgcagctcttctaatacggttgacaagcgaggattctgatctccgaagtgcactt
cttttggaacaggctgcacattgtttcataaacatgaagaaccccatggttagaaaatac
gcatttcacatgatcctggcaggccaccgttttagtaaagcagggcagaaaaagcacgct
ttgcgctgctattgtcaagccatgcaagtttacaaaggaaaaggctggtctctggcagag
gatcatatcaacttcaccatcgggcgccagtcctatactctgaggcagctggacaacgct
gtttccgctttcagacatattttaatcaatgaaagcaagcagtctgccgctcagcaggga
gccttcctcagagaatatctctatgtttataagaatgtaaatcagctgtcaccagatggc
cctttaccacagcttcccttaccatacattaacagttcagcaacacgggttttctttggc
catgacagacgaccagcagatggtgaaaagcaagcggctactcatgtgagtcttgatcaa
gagtatgacgctgagtcgtcccagcagtggcgagaacttgaggagcatgttgtggctgtg
gctaataaaggagtaatcccatccagtttctatcctacacagtattgcttgaacagttac
tccgataactccagatttccactggcagttgtagaagagccaattactgtggaagtggct
tttagaaaccctttaaaagttccgcttttgctgtctgatttgtcattgctctggaagttt
cagcctaaagacaccagtgggaaagacactgaaaaagaacgagttacaggtgaacctgaa
atgattggaactgaagttatttcagaatttttaattaacagtgaagaatctaaagtggca
agactgaagctctttccccatcacataggggagctgcacatcctgggagttgtgtataat
cttggcactattcagggctccgtgacagtagatggcattggtgctcttcctggatgtcac
acaggaaaacattctctgggtatgtccgtccgagggagacaggatttagaaattcaaggc
cctcgacttaacaacaccaaggaggagaagacgtctgttaagtatggccctgaccgacgt
ttggaccccatagtcacggaagagatgccgctcctggaggtgttctttatacattttcct
acaggtctcctctgtggagaaatccgaaaagcatatgtagagtttgtcaatgtcagccag
tgtcctctgactgcattgaaagtggtatctaaacgtcccgagttcttcacttttggtggc
aatactgctgctctaacaccgctgagcccctccacatctgagaactgcagtgcctataag
acggttgtgacagcgtccccctccttggggacagcatttgtgtcaacagcatcatctgtg
gacttcggaactggcacaggacagcagctggaggccattcctgtcccccttcctgactct
gtgctactccctggagcttctgtccagctgccaatgtggcttcgtgggccagacgaagaa
ggtgtccatgaaattaactttttattttactatgaaagtgttaaaaagcagcccaaaaaa
cgacacagaatattaagacacactgcagttatttgcactagccggtctttgaacgtgcga
gcgactgtttgtagaagtaattcccttgaagacgaagaaggcaggggcggcaatatgcta
gtcttcgtggatgtagaaaataccaatactagtgaagcgggagttaaggagttccacatg
gtgcaggtgtcaagtagcagcaagcactggcagctacacagatccgtgaacatctccgaa
aacagagatgccaaacttgccagtagagagaagggaaagttttgcttcaaggcagtaaga
tgtaaacaaaaggaaggtgataaacagtcctcagaaaaatacacttttgcagatatcatc
tttggaaatgaacagataataagttcagcaagtccatgtgcagatttcttttaccgaagt
ttatcctcagagttgagaagaacacaagaccagcttcccgcctatcccgagaaaaatgcc
tcagagggtgctgtcaggctgattgagaagtgcagtgaggtggacctgagcattgtcgtc
ctgtggaaggcatacgttgtggaagataacaagcagcttattttagaaggccagcatcat
gttgtcgttcgcactgttggcaaagaagcctgttcacactctcagaaacaggagccacca
gaaatggaactattaaagttttttaggccagaaaacactacagtttctgcaagaccatca
gtagagcagctttctaatctcattaaaacaagtctccactacccggagtcatttcatcat
ccatttcatcagaaaagcctttgcttagtgccagtcacccttttactttctaactgttct
aaggctgaggtagatgtaatagttgatctccggcataaaacaacaagtccagaggcattg
gaaactcacggatcattcacatggcttggacagacacagtataaactccagctgaaaagc
caagagacgcacagtttgcagctgaaggcatgctttgttcatacaggcgtttataacctt
ggaactccaagggtattcgccaagttatcggaccaggtgacagtatttgaaacaagtcag
cagaactccatgcctgctttgattatcatcaataacgcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (1)   
   RefSeq(pep) (10)   
DNA sequence (14)   
   RefSeq(nuc) (10)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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