KEGG   Rattus norvegicus (rat): 291787
Entry
291787            CDS       T01003                                 
Symbol
Rbbp8
Name
(RefSeq) DNA endonuclease RBBP8
  KO
K20773  DNA endonuclease RBBP8 [EC:3.1.-.-]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    291787 (Rbbp8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    291787 (Rbbp8)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-C complex
     291787 (Rbbp8)
SSDB
Motif
Pfam: CtIP_N SAE2
Other DBs
NCBI-GeneID: 291787
NCBI-ProteinID: NP_001127889
RGD: 1308872
Ensembl: ENSRNOG00000012899
UniProt: B1WC58
Position
18:3198188..3263643
AA seq 893 aa
MSISGSSCGSPNSTDISSDFKELWTKLKEYHDKEVQGLQIKVTKLKKERILDAQRLEEFF
TKNQQLRDQQKVLQETIKILEDRLRAGLCDRCAVTEEHMHKKQQEFENIRQQNLRLITEL
MNEKSALQEENKKLSEQLQQKMESGQQDQVAELECEENIIPDSPITSFSFSGINRLRRKE
NLHVRYVEQTHTKLEHSACTSELRKFSKGSTPAPVNSEEHEILVADTCDQSHSPLSKICG
TSSYPADKLSSNLDAVVAETLGLDGQEESEPQGPVSPLGNELYHCLKEDHKKQPFMESAI
RNEDNVRFSDSASKAPPRELTTRGSSPVFGPTSTVKTHLGLKTSFSPSLLDSGKKNLLST
APFSSISVSRSEKVRSKSEDNALFTQQSAGSEVKVISQSFPSKQILTSKNVSDSVDEQGG
ADHMKDAVSDKHLVPLKSLGGKASKRKRTEEEGEHAVHCPQTCFDKENALPFPMENQFPV
NGDHVMDKPLDLSDRFAANQRQEKNHGDETCKHKLKQVTIYEALKPVPKGSSSGRKALSG
ACTLAQDSAETYCLQQRTLQCSSKFSPDHNTQLQIKEENPVFKTPPRSQESLETENLFGD
VKGIGSLVPIKVKGRSAHGGCELASVLQLNPCRVAKTKSLPSNHDMSFENIQWSVDPGAD
LSQYKMDVTVIDTKDSSHSRLGGETVDMDCTLVSETMLLKMKKQEQREKSPNGDIKMNDS
LEDMFDRTTHEEYESCLADNFSQVPDEEELSDTTKKPNIHGDKQDGIKQKAFVEPYFKDK
ERETSIQNFPHIEVVRKKEERRKLLGHTCKECEIYYADLPAEEREKKLASCSRHRFRYIP
TNTPENFWEVGFPSTQTCLERGYIKEDLDPCPRPKRRQPYNAVFSPKGKEQRT
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgagcatttcaggaagcagctgtggaagccctaattccacagatatatccagtgacttc
aaggagctctggacaaaactaaaagaatatcatgataaggaagtacaaggtttacaaatc
aaagtaaccaaactgaaaaaggaaagaattttagatgcacagagactagaagaattcttc
accaaaaatcaacagctgagagaccagcaaaaagttcttcaggaaaccattaaaatttta
gaagataggttaagagcaggactgtgtgatcgctgtgcagtaactgaagagcatatgcac
aaaaagcagcaggagtttgaaaacatccgacagcagaaccttaggcttatcacagagctc
atgaatgaaaagagcgctcttcaggaagaaaacaaaaagctttctgagcaactgcaacag
aaaatggaaagtggtcaacaggatcaagtagctgagcttgaatgtgaggaaaacattatt
ccagactcaccgataacttccttttccttttctggcattaaccgcctacgaagaaaggag
aatctccatgtccgatacgttgaacaaacgcacactaaattggagcactctgcatgtaca
agtgaattaagaaagttttccaagggttcaactcctgcaccagttaactctgaggaacat
gaaattctagtagccgacacttgtgatcagagtcattctccactgtctaaaatatgtgga
acaagcagttaccccgctgacaagttatcttctaacttagatgctgttgttgctgagacg
cttggacttgatggtcaagaagaatctgaaccccaaggtcctgtgagccctcttggaaat
gagctctaccactgtctcaaagaagatcacaaaaaacagccttttatggaatctgcaata
aggaacgaagataacgtaaggttttcagactctgcttcaaaggcccctccccgagaactc
actactcgggggtcatctcccgtgtttggacctacctctaccgtgaaaactcatttgggt
ttgaaaacaagtttctccccttcactcttagacagtgggaaaaaaaaccttctgagcaca
gctccctttagcagcatttctgtttctagatcagagaaagttagatccaaatcagaggat
aatgcccttttcacacaacaaagtgctgggtctgaggtaaaggtcatcagccagtcattt
cctagtaagcagattcttacaagtaaaaacgttagtgactctgtcgacgagcagggtggt
gctgatcacatgaaagatgctgttagtgataaacacctggtgcctttgaaatcactggga
ggcaaagcgtccaaaaggaagaggactgaggaagagggtgagcacgcagtacactgcccg
cagacctgttttgataaggaaaatgcccttccttttccaatggagaatcagttccctgtg
aatggagaccatgtgatggataaacctctggacctgtcagatcggtttgcagctaatcag
cgtcaagagaagaaccacggggatgaaacttgcaaacacaaacttaagcaagtgactatt
tatgaggctctgaagcccgttcccaagggctcctcctcaggccgcaaggccttgagtggg
gcctgcacactagcccaagactctgcagagacatactgcttacagcagcgcaccctccag
tgctctagtaaattctctccagaccataacactcaattacagataaaagaagaaaatcct
gttttcaaaacacctccacgttcacaggaaagtttggagacagagaatctttttggtgat
gtgaagggtattgggtctcttgtgccaataaaagtaaaaggcagatcagcccatggagga
tgtgagcttgcatcagttcttcagttaaacccctgcagagttgctaagacaaagtctctg
cccagcaaccacgatatgtcatttgaaaatatccagtggagtgtagatccgggagcagac
ctttctcaatataaaatggatgttactgtgatagatacaaaggacagcagtcactcacga
ctgggaggagagacagtggacatggactgtacattggtcagtgaaaccatgcttttaaaa
atgaagaaacaagaacaaagagagaaaagtccaaatggagacataaaaatgaatgatagc
ttggaagatatgtttgatcggacaacacatgaagaatatgaatcctgcttggcagataac
ttctcccaggtaccagatgaggaagaattgtctgataccacaaagaaacctaacatacac
ggtgataaacaagatggaatcaagcagaaagcatttgtggagccatattttaaagataag
gagagagaaactagcatacagaattttcctcatattgaggtagttcggaaaaaagaagaa
agaaggaaattgcttgggcacacatgtaaagaatgtgaaatttattacgcagatttgcca
gcagaagaaagagaaaagaagttggcttcctgctcaagacaccgatttcgctacattcca
accaacacaccagagaatttctgggaagttggttttccttctactcagacgtgtctggaa
aggggttatatcaaggaagatctcgatccttgtcctcgtcccaaaagacggcagccttac
aacgcagtcttttctccaaagggcaaagaacagaggacctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (12)   
   RefSeq(nuc) (6)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

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