KEGG   Rattus norvegicus (rat): 291852
Entry
291852            CDS       T01003                                 
Symbol
Katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    291852 (Katnb1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     291852 (Katnb1)
SSDB
Motif
Pfam: WD40 Katanin_con80 ANAPC4_WD40 NBCH_WD40 RMC1_N WDR54 eIF2A PROPPIN Ge1_WD40
Other DBs
NCBI-GeneID: 291852
NCBI-ProteinID: NP_001019917
RGD: 1311256
Ensembl: ENSRNOG00000014626
UniProt: Q4VFZ4
Position
19:complement(9927249..9946750)
AA seq 655 aa
MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVV
DLTRVTRTGTVTQDPVQASQPQTQQTPNPGVSLRRIYERPSTTCSKPQRVKHNSESERRS
PSSEDDKDERESRAEIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPPEDDIATAKEASKP
SPAMDVQLPVPSQEVPARPSVMTSTPAPKGEPVIIPATRNEPIGLKASDFLPAVKVPQQA
ELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVVVDL
LNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAP
PSVGVDISREERLHKCRLCFKQLKSISGLVKSRSGLSGRHGSAFRELHLLMASLD
NT seq 1968 nt   +upstreamnt  +downstreamnt
atggccacccctgtggtcaccaagactgcctggaagttacaagagatcgtcgcccatgcc
agcaatgtgtcctccttggtgctgggcaaggcctcggggcggctattggccactggtggg
gatgactgtcgagtcaacctgtggtccataaacaagcctaactgtatcatgagtctgaca
ggtcacacgtcccccgtggagagtgtccgcctcaacacccctgaggagctcatcgtagct
ggttcccagtcgggctccatccgcgtctgggacctggaagctgctaaaattcttcgaaca
ctcatgggccacaaagccaacatctgcagcctggatttccacccctatggcgaatttgtg
gcctcaggttcccaggacacaaacatcaagctttgggacatcaggagaaaaggctgtgtc
ttccgatatagggggcacagccaggctgtgcggtgtctccggttcagccctgatgggaag
tggctggcatcagcagcagatgaccacacagtgaagctttgggatctgacggctggcaag
atgatgtccgagttccctggtcatacagggcctgtcaacgtggtggagtttcaccccaat
gaatatctccttgcttctggcagctccgacaggacaatccgcttctgggacctggagaag
ttccaggtggtgagctgcattgaaggggagccggggcctgtgaggagtgttctcttcaac
cctgatggctgctgcctgtatagcggctgccaggactcgctgcgtgtctacggctgggag
cctgagcgctgctttgatgtggtccttgtcaactggggcaaggtggctgacctggccatc
tgcaatgaccagctgataggtgtggctttctcccagagtaatgtctcctcttatgtggtg
gacctgacaagagtcaccaggacaggaactgtgacccaggaccctgtgcaagctagccag
cctcagacacaacagacccctaaccctggtgtctcccttcgccgcatctacgagcggccc
agcacaacctgcagcaagcctcagagggtaaagcacaactcagagagtgagcggcgcagc
cccagcagtgaagatgacaaggatgagcgtgagtcgcgggccgagatccagaatgcggag
gactacaatgagatcttccagcccaagaacagcatcagtcggacaccgccccggagaagt
gagcccttcccagcgcccccagaagatgacatagccacagcaaaggaggcctcgaaaccc
agcccagccatggatgtgcagttgccggtgccaagtcaggaggtcccagcacgaccatca
gtcatgacttccactcctgcacccaagggtgagcctgtcatcatccctgccacgcggaat
gagcccattggcctaaaggcctcggacttcttgcccgccgtgaaggtcccccagcaggca
gagctggtagatgaggatgccatgtcacagatccgcaaaggccacgacactatgtgcgtg
gtgctcaccagccgccacaagaacctggacactgtgcgagctgtgtggaccacaggagat
atcaagacatcggtggactctgcagtggccatcaatgacctgtctgtggtcgtggacctt
ctgaatattgtcaaccagaaagcctccctgtggaagctggacctgtgcaccactgtgctg
ccccaaattgagaaacttctgcagagcaagtatgagagctatgtccagactgggtgtacc
tccctcaagctgatcctgcagcggttcctacccctcatcactgacattttggcagccccg
ccctctgtgggtgtggacatcagccgagaggagaggctgcataagtgtcgactctgcttc
aagcagctcaagagcatcagtggcctcgtcaagagcaggtcgggtttgagcggccgccat
ggcagtgccttccgtgagctgcacctactcatggccagtttggactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (13)   
   RefSeq(nuc) (9)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (41)   

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