KEGG   Rattus norvegicus (rat): 291877
Entry
291877            CDS       T01003                                 
Symbol
Nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
  KO
K14397  cleavage and polyadenylation specificity factor subunit 5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    291877 (Nudt21)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    291877 (Nudt21)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor Im (CFIm)
     291877 (Nudt21)
SSDB
Motif
Pfam: NUDIX_2
Other DBs
NCBI-GeneID: 291877
NCBI-ProteinID: NP_001034093
RGD: 1305766
Ensembl: ENSRNOG00000042983
UniProt: Q4KM65 B4F764
Position
19:10980797..10996903
AA seq 227 aa
MSVVPPNRSQTGWPRGVNQFGNKYIQQTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSV
AARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEG
LKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQ
EKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq 684 nt   +upstreamnt  +downstreamnt
atgtctgtggtgccgcccaatcgctcgcagacgggctggccccggggggtcaaccaattc
ggtaacaagtacatccagcaaaccaagcccctcaccctggagcgcaccattaacctgtac
ccacttaccaactatacttttggtacaaaggagcccctctatgaaaaggacagctctgtg
gcggccagatttcagcgcatgcgggaggaatttgataagattgggatgagaaggactgta
gaaggggttctgatcgtacacgagcaccgcctgccccacgtgctactgctacagctggga
acaaccttcttcaaactacctggcggtgaacttaacccaggagaagatgaagttgaagga
ctaaaacgcttaatgacagagatactgggtcgtcaagatggagtcctgcaagactgggtc
atcgatgactgcattgggaactggtggagaccaaattttgaacctcctcagtacccgtat
attcctgcacatataacaaagcccaaggaacataagaagttgtttctggttcagcttcaa
gagaaagccttgtttgcggtccctaagaattacaagctggtagctgcaccgttgtttgaa
ctgtacgacaatgctccgggatacggacccatcatttctagtcttcctcagctgctgagc
aggtttaattttatatacaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

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