KEGG   Rattus norvegicus (rat): 291912
Entry
291912            CDS       T01003                                 
Symbol
Nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2
  KO
K10165  nucleotide-binding oligomerization domain-containing protein 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04621  NOD-like receptor signaling pathway
rno04668  TNF signaling pathway
rno05152  Tuberculosis
rno05321  Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04668 TNF signaling pathway
    291912 (Nod2)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    291912 (Nod2)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    291912 (Nod2)
  09163 Immune disease
   05321 Inflammatory bowel disease
    291912 (Nod2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:rno04054]
    291912 (Nod2)
Pattern recognition receptors [BR:rno04054]
 Cytoplasmic pattern recognition receptors
  NOD-like receptors
   291912 (Nod2)
SSDB
Motif
Pfam: NACHT CARD NLRC4_HD2 NOD2_WH LRR_6 LRR_4 AAA_29 AAA_22 AAA_16 AAA_25 AAA_30 ABC_tran G-alpha NB-ARC nSTAND3
Other DBs
NCBI-GeneID: 291912
NCBI-ProteinID: NP_001401840
RGD: 1306368
Ensembl: ENSRNOG00000014124
Position
19:complement(34555832..34596281)
AA seq 1012 aa
MCSQEDFQAQRSQLVALLVSGSLEGFESILDWLLSWDVLSREDYEGLSLPGQPLSHSARR
LLDTVCNKGVWGCQKLFEAVQEAQANSHTFELQGCWDVHSLHPTRDLQSHRPAIVRRLCS
HVEAILELARDEGFLSQYECEEIRLPIFTSSQRARRLLDLAAVKANGLAAFLLQHVRKLP
ASLSLPYEAAECQKFTAKLRTMVSAQSRFLSTYDGSENLCLEDIYTENTLELRTEVGTAG
ALQKSPATLGLEELFGTHGHLNKDADTILVVGEAGSGKSTLLQRLHLLWASGQNFREFLF
IFPFSCRQLQCMTKPLSLRTLLFEHCCWPDVGQDDVFQFLLDHPDRVLLTFDGLDEFKFR
FTDRERHCSPLDPTSVQTLLFNLLQGNLLKNACKVLTSRPDAVSALLRKFVRTECHLKGF
SEEGIKLYLRKHHREPGVADRLIHLIQATSALHGLCHLPVFSWMVSRCHRELLLQNRGFP
TTSTDMYLLILQHFLLHASPPDSFPLGLGPGLLQSRLSTLLHLGHLALQGLAMSCYVFSA
QQLQAAQVDSEDISLGFLVRAQSVVPGSKAPLEFLHITFQCFFAAFYLAVSADTSAASLK
HLFSCGRPGNSLLLRLLPNLCIQGSRVKGGQAALLQKAEPHNLQITAAFLAGLLSQQHRD
LLAACQVPERVLLQRQARARSCLAHSLREHFHSIPPAVPGETKSMHAMPGFIWLIRSLYE
MQEVQLAREAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVALQLDHNSVGDVGVE
QLLPCLGVCTALYLRDNNISDRGARTLVECALRCEQLQKLALFNNKLTDGCASSVAKLLA
HKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLQFLGFWGNSVGDKGSQALAEVVADHQR
LKWLSLVGNNIGSVGAHALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFL
KLSNNGITYRGAEALLQALNRNSTVLEVWLRGNTFSPEEAQTLSSSDARLLL
NT seq 3039 nt   +upstreamnt  +downstreamnt
atgtgctcacaggaagacttccaggcccagaggagccagctggtggcactgttggtctca
gggtccttggagggctttgagagcatcttagactggctgctgtcttgggatgtgctctcc
agggaggactatgagggcctcagcctccctgggcaacctctctcccattctgccaggcgt
ctgctggacacagtctgcaacaagggtgtttggggctgtcagaagctcttcgaagctgtg
caggaggcccaggccaacagtcacacctttgaactgcaagggtgctgggacgttcactcc
cttcatcccaccagagacctgcagagtcaccggccagcaattgtacggaggctctgcagc
catgtagaagccatattggagctggcaagggatgaggggtttctgagccagtacgaatgt
gaggagatcaggttgccaatcttcacatcatcccagagggcaagaagactgcttgatctc
gccgcagtgaaggcaaatggactggccgccttccttctacagcacgtcaggaaattacca
gcctcactgtctctgccttacgaggctgctgagtgtcagaagttcactgctaagctgagg
accatggtgtcagctcagtctcgcttcctcagtacttacgatgggtcggagaatctttgc
ctggaggatatctacacggagaacaccttagagctgcggacagaggtgggcacagcgggg
gccttgcagaagagccctgccaccctgggcctggaggaactctttggaacccacggccac
ctgaacaaagacgccgacactatactggtggtgggcgaagcgggcagcggcaagagcacc
cttctgcaacgtttgcacttgttgtgggcatcagggcagaacttccgagagttcctcttc
attttcccattcagctgccggcagctgcaatgcatgaccaaacctctgtccctgaggaca
ctgctctttgagcattgctgttggcctgatgtcggtcaggatgacgtcttccagttcctc
cttgaccatcctgaccgtgtcctgttaacctttgatggcttggatgagttcaagttccgg
ttcacagaccgggagcgccactgctctccgctcgaccccacgtcagtccagactctgctt
ttcaaccttcttcaggggaacctgctgaagaatgcctgcaaggtactgaccagccgtcca
gacgccgtgtcagcgctcctcagaaagttcgtccggacagagtgccaccttaagggcttc
tccgaagagggcatcaaactgtacctgagaaagcaccaccgggaacccggggtggcagac
cgcctcatccacctgatccaagctacctcagccctgcacggtttgtgccacctccctgtc
ttctcatggatggtgtccagatgtcaccgagagctgttgctacagaacaggggcttccca
acaaccagcacggacatgtacctcttgatcctacagcatttcctgctgcacgcctcccct
ccggactccttcccccttggtctgggacctggactcctccaaagccggctctccaccctc
ctgcaccttggccacctggctctccagggcctggccatgagctgctatgtgttctcagcc
cagcagctgcaggcagcacaggtggactctgaggatatttctcttggtttcctggtacgc
gcccaaagtgtggtgcccgggagcaaggcacccctggaattcttgcacattaccttccag
tgcttttttgccgcgttctacttggctgtcagtgctgacacatcggcggcctctctcaag
cacctcttcagctgcggccggccgggcaactcactgctgctaaggctgctgcccaacctg
tgtatccagggctccagagtcaagggcggccaagcagctctgctgcagaaggctgagccg
cacaacctgcagatcacagcagccttcctagcgggtctgttgtcccagcagcatcgggac
ctgttggctgcatgccaggtccctgagagggtgctgctccagcgtcaggcccgtgcccgc
tcctgcctggcacacagcctccgggagcacttccattccatcccgccggccgtgcccggt
gagaccaagagcatgcatgctatgcccggcttcatttggctcatccggagcctgtacgag
atgcaggaggtgcagttggcccgggaggctgtccgtcgcttggacattgggcacctgaag
ttgacgttttgcagggtgggccctgcagagtgcgctgccctggcctttgtgctgcagcat
ctgcagcggcctgtggccctgcagttggaccacaactccgttggcgatgtcggagtggaa
cagctgctgccatgcctcggcgtctgcacagctctgtacttgcgagataacaacatctcc
gatcgaggtgcccgcacgctggttgagtgtgctcttcgctgtgaacagctgcagaagcta
gctctcttcaacaacaaactcactgatggctgtgcctcctccgtggccaagctccttgca
cacaagcagaacttcctatctctgagggtggggaacaatcacatcactgctgctggggct
gaggtgctggcccagggactcaagagcaacacctccctgcagttcctggggttctggggc
aacagtgtaggtgataagggctcccaagccctggctgaagttgtggctgatcaccagagg
ctaaagtggctcagcctggtaggaaacaacattggcagcgtgggtgcccacgccctagcc
ctgatgctggagaagaacaagtcactagaggagctctgcctagaggaaaaccatatctgt
gacgaaggggtgtattctcttgcagaaggactgaagagaaattcaactttgaaattcttg
aaactgtccaacaatggcattacctaccggggcgcagaagccctcctgcaggcccttaac
aggaacagcactgttctggaggtttggctccgagggaacacattctctccggaggaagcc
caaacactcagttccagtgatgccagactcctgctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (15)   
   Pfam (15)   
All databases (43)   

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