KEGG   Rattus norvegicus (rat): 291987
Entry
291987            CDS       T01003                                 
Symbol
Utp4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    291987 (Utp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    291987 (Utp4)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    291987 (Utp4)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 PROPPIN NBCH_WD40 Frtz PQQ_2
Other DBs
NCBI-GeneID: 291987
NCBI-ProteinID: NP_001009640
RGD: 1311341
Ensembl: ENSRNOG00000020333
UniProt: Q5I0C9
Position
19:51696437..51730323
AA seq 686 aa
MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHES
RGTEALCWAEGQRLFSAGLNGEILEYDLQALNIKYTLDAFGGPIWSMTASPSGSQLLVGC
EDGSVKLFEVTPDKIQFARNFDRQKSRILSLSWHPAGTHVAAGSIDYISVFDVKSGSITR
KMVLDRQHLGVTKSRCIVWGVAFLSDGTVISVDSVGKVQLWDSATGTLVKSHLIANADVQ
SIAVADQEDSFVVGTAEGTVFHFQLVSVTSNSSEKQWVRTKPFQHHTHDVRTVAHSPTAL
ISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRRLISCSKRRQLLLFQFAHHLELWRL
GSTAATGKNGDTLPLSKNADHLLHLKTKGPENIICSCVSPCGSWIAYSTASRFFLYRLKY
ERDNISLQRVSKLPAFLRSALHILFSEDSTKLFVASNQGSLHVIHLSEGSFKHLHTFQPQ
SGTVEAMCLLAVSPDGNWLAASGTSAGVHIYDLHHLKLHCTVPAYNFPVTALAIAPNTNN
LVIAHSDQQVFEFSIPDKQYTEWSRSVQKQGFHQLWLQRDTPITHISIHPKRPMHILLHD
AYMFCIIDKSLPLPNDKTVLYNPLPPKNESDVFLRRTTHGFKMSKIYKPLLFMDLLDERT
LVAVERPLDDIIAQLPPPIKKKKFGT
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgggtgaatttaaagtccatcgagttcgtttctttaattacgttccatcaggcatccga
tgtgtggcttacaataaccagtcaaacagattggctgtttcacgaacagatggcacggtg
gaaatttataatttgtctgcaaactattttcaggagaaatttttcccaggtcatgagtct
cggggtaccgaagccctgtgttgggcagaaggacagcggctctttagtgccggactgaat
ggagaaattcttgagtatgacctacaggcactaaacatcaagtacactttggatgccttt
ggaggaccgatttggagtatgaccgccagccccagtggctctcaacttttggttggctgt
gaagatggctccgtgaaattatttgaagtcaccccagacaaaatccaatttgcaagaaat
ttcgatcgtcaaaaaagtcggatcctgagtctcagctggcatcctgctggtacccacgtt
gcagctggttccatagactacattagtgtgttcgatgtcaaatcagggagcataacccgg
aagatggttttagacaggcagcacctgggagtgaccaagtcaaggtgcatagtgtggggt
gttgccttcctgtccgacggcactgtcataagcgtggactcagttggaaaggtgcagtta
tgggactcagctactgggacacttgtcaagagccatctcatcgcaaacgctgacgtgcag
tctattgctgttgctgatcaagaagacagttttgtggtgggcacagccgagggcacagtg
ttccatttccagctggtgtcggtgacttccaacagcagcgagaagcagtgggtgcggacg
aaaccattccagcaccacacacacgacgtgcgcactgtggcccacagcccaacagccctg
atatcaggaggcaccgacacccacctagttattcggcctctcatggagaaagtggaggta
aagaactacgatgccgctctccgaaagatcactttcccccatcggcgtctcatttcctgt
tcaaagcgaaggcagcttctccttttccagtttgctcaccacttggaactctggagacta
ggatccacagccgcaacaggcaagaatggagatactcttccgctctctaaaaatgcagac
catctcctgcacctcaagacaaagggccctgagaacattatctgcagctgcgtctccccg
tgtggaagttggatagcctattctacagcgtctcggttttttctctatcgattgaaatat
gaacgtgataacattagcctccaaagagtttccaaattaccagcattccttcgctctgcc
cttcatattttgttttctgaagattcaacaaagctctttgtggcatcaaatcaagggtct
ctacatgtcatccatctttcggaaggaagcttcaagcacttgcatactttccagccacaa
tcagggacagtggaggccatgtgtcttttggcagtcagtcccgatgggaattggctagct
gcatcaggtaccagtgctggagtccacatatatgatctgcatcatctaaagcttcactgc
acagtgcctgcttacaatttcccagtgactgctctggccatcgcccccaataccaacaac
ctggtcattgctcattctgaccagcaggtatttgagttcagcatcccagacaagcagtat
acagagtggagccgctctgtccagaagcaaggatttcaccagctgtggctccaaagggat
actcccatcacacacatcagcatccatcccaagagacccatgcacatcctcctccatgac
gcctacatgttctgcatcattgacaagtccttgccacttccaaatgacaaaactgtgctc
tataatccgcttcctccgaaaaacgaatcagatgtcttcctgaggcgcacgacccatgga
tttaaaatgtctaagatatataagcccttactctttatggatcttttggatgaaaggaca
cttgtggcagtagaacgacctctggatgacatcattgctcagctcccaccacccatcaaa
aagaagaaatttggaacttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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