KEGG   Rattus norvegicus (rat): 292023
Entry
292023            CDS       T01003                                 
Symbol
Aars1
Name
(RefSeq) alanine--tRNA ligase, cytoplasmic
  KO
K01872  alanyl-tRNA synthetase [EC:6.1.1.7]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    292023 (Aars1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rno01007]
    292023 (Aars1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    292023 (Aars1)
Enzymes [BR:rno01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.7  alanine---tRNA ligase
     292023 (Aars1)
Amino acid related enzymes [BR:rno01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   292023 (Aars1)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    292023 (Aars1)
 Prokaryotic type
    292023 (Aars1)
SSDB
Motif
Pfam: tRNA-synt_2c DHHA1 tRNA_SAD
Other DBs
NCBI-GeneID: 292023
NCBI-ProteinID: NP_001093987
RGD: 1304832
Ensembl: ENSRNOG00000018404
UniProt: P50475
Position
19:55906694..55930499
AA seq 968 aa
MDSTLTAREIRERFINYFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTVDPS
HPMAKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALE
LLTQEFGIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEAKILPGNMKDNFWEMGD
TGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDT
GMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDTDGIDMAYRVLAD
HARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDA
FPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCQTIPGDTAWLLYDTYGF
PVDLTGLIAEEKGLVVDMDGFEEERKLAQLKSQGKGAGGEDLIMLDIYAIEELRAKGLEA
TDDSPKYNYHSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGG
QIFDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIYGNLRVGDQVRLFIDEPRRRP
VMSNHTATHILNFALRSVLGDADQKGSLVAPDRLRFDFTAKGAMSTEQIKKTEEIVNGMI
EAAKPVYTLDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSV
EFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLSAMEVK
VKAQSAPNKDVQKEIADLGEVLATAVIPQWQKDEQRETLKSLKKVMDDLDRASKADVQKR
VLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKTHSPQTSAMLFTVDNEAGKIT
CLCQVPQNAANRGLKASEWVQQVSGLMDGKGGGKDMSAQATGKNVGCLQEALQLATSFAQ
LRLGDVKN
NT seq 2907 nt   +upstreamnt  +downstreamnt
atggactccactctaacagcacgagagatccgagagcggtttataaattatttcaaacga
aatgagcacacctatgtccactcctccgccaccatccctctggacgaccccaccttgctc
ttcgccaacgcaggcatgaaccagttcaaacccatcttcctaaacacagtagacccttct
caccccatggcaaagctgagcagagctgccaatacccagaagtgcatccgagccgggggc
aaacacaatgacctggatgacgtgggcaaagatgtctaccaccacaccttctttgagatg
ctgggctcctggtcttttggggactattttaaggaattggcatgtaagatggctctggaa
cttcttacccaggagtttggtattccagttgaaagactctatgttacttactttggtggg
gatgaggcagccggcctagagccagatctggagtgtagacagatctggcaaaatttagga
ctggatgaagccaaaattctccctggcaacatgaaggacaacttctgggagatgggtgac
acgggcccctgtggtccctgcagtgagatccactatgaccgcattggtggcagggacgct
gcacaccttgtcaaccaggatgaccccaatgtgctagagatctggaatctcgtgttcatc
caatataacagggaatctgatggtgttctgaaacctctccccaagaaaagcattgacaca
gggatgggcctggagagattggtgtctgtgctgcagaacaagatgtccaactatgacact
gaccttttcgttccttacttcgaagccattcagaagggtacaggcgcccggccgtatact
gggaaggttggtgctgaggacactgatggaattgacatggcctacagggttctggctgac
cacgcccggaccatcactgtggcgctggctgatggcgggcgacctgacaacacaggtcgg
gggtatgtgctgagacggatccttcgccgagctgttcgctattcccacgagaaactgaac
gccagcaggggtttcttcgccacattagttgatgttgtcgttcaatccctgggagacgcc
tttcctgagctgaagaaggacccagatatggtgaaggacatcattaatgaagaagaggta
cagtttctcaagactctcagcagagggcggcgcatcctggaccggaaaattcagagctta
ggagactgccaaaccatcccaggtgataccgcttggctcctctatgatacttacggattc
ccagtggatctcactggattgattgctgaagagaagggcctggtggtagatatggatggc
tttgaagaagagaggaaactggcccagctgaagtcacagggcaagggggcagggggcgaa
gacctcatcatgctggacatttatgcgattgaagaactccgggcaaagggtttggaggcc
acagatgattctccaaagtataactaccattcagactccagtggtagctatgtgtttgaa
tgtacagtggctaccgtgcttgctctgcgtagggaaaagatgtttgtggacgaggtggtc
actggccaggagtgcggagtggtgctggacaagacctgtttctatgccgagcaaggaggg
cagatcttcgatgaaggctacttggtgaaggtcgacgacagcagtgaggataaaactgag
tttacagtgaagaatgctcaggtccgaggcgggtatgtgctgcacataggaacaatatat
ggtaacctgagagtgggggatcaagtccggctgttcattgacgagccccgacgaagacct
gtcatgagcaaccatacagctacacacatcctgaacttcgccttgcgctcggtgcttggg
gatgcagaccagaaaggttcactggttgctcctgaccgccttcggtttgacttcactgcc
aagggagccatgtccacggagcaaatcaagaagactgaggagattgtcaatggcatgatt
gaggcagctaagcctgtctacaccctggattgtcccctggctgcagcaaaagccatccag
ggccttcgagctgtatttgatgagacctatcctgaccctgtgcgagttgtctccattgga
gtcccagtgtcagaactgctagatgacccctccgggcctgccggctcccttacttctgtt
gagttttgtggaggaacacatctacggaattctagccatgcaggagctttcgtgatagtg
actgaagaagccattgccaagggtatccgcaggattgttgctgtcacaggtgctgaagcc
cagaaggccctcaggaagtcagaaaccttgaagaaatctctctcggccatggaggtcaaa
gtgaaggcccagtctgcacccaacaaggatgtgcagaaggaaattgctgaccttggtgag
gtcctggccactgcagtcattccccagtggcagaaagatgaacaacgggagactttgaaa
tccctgaagaaagtcatggatgacctagaccgggccagcaaagccgatgtccagaagcga
gtgttagagaagactaagcagctgattgacagcaaccccaaccagcctctggtcatcctg
gagatggagagcggtgcatcggccaaggccctgaatgaagctttgaagcttttcaagaca
cattctcctcagacatctgcaatgctcttcacagtagacaatgaggctggcaagatcaca
tgcttgtgtcaggttcctcagaatgcagccaaccgggggctaaaagccagcgagtgggtc
cagcaggtttcaggcctgatggatggtaaaggtggtgggaaggacatgtctgcccaggcc
acaggcaagaacgtgggctgccttcaggaagcactgcagctggctacttcctttgcccag
ctccgtctcggagatgtaaagaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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